RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 CBX2Q14781 532 aaPredicted RBP8.35□□□□□ -1.07
VCAN-206ENST00000505615 PTGISQ16647 500 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 TRIM71Q2Q1W2 868 aaKnown RBP8.35□□□□□ -1.07
VCAN-206ENST00000505615 TKFCQ3LXA3 575 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 C4orf48Q5BLP8 95 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 TRMT2AQ8IZ69 625 aaKnown RBP8.35□□□□□ -1.07
VCAN-206ENST00000505615 CCDC155Q8N6L0 562 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 OR6J1Q8NGC5 347 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 ARHGAP45Q92619 1136 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 SAMD11Q96NU1 681 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 CRBNQ96SW2 442 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 MAP10Q9P2G4 905 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 INSL6Q9Y581 213 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 FRYLO94915 3013 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 MED19A0JLT2 244 aaPredicted RBP8.34□□□□□ -1.07
VCAN-206ENST00000505615 LOC730098B7Z3J9 87 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 H0Y858 1186 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 EFCAB14O75071 495 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 LGR5O75473 907 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 BCAR3O75815 825 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 PARNO95453 639 aaKnown RBP8.34□□□□□ -1.07
VCAN-206ENST00000505615 CHGBP05060 677 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 LINC00271P0C7V0 271 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 CKBP12277 381 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 AVPR2P30518 371 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 GTF2F1P35269 517 aaKnown RBP eCLIP8.34□□□□□ -1.07
VCAN-206ENST00000505615 NBL1P41271 181 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 ALDH5A1P51649 535 aaPredicted RBP8.34□□□□□ -1.07
VCAN-206ENST00000505615 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 SIGLEC14Q08ET2 396 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 NR5A1Q13285 461 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 TTF1Q15361 905 aaPredicted RBP8.34□□□□□ -1.07
VCAN-206ENST00000505615 CTR9Q6PD62 1173 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 SESTD1Q86VW0 696 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 FBXO11Q86XK2 927 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 GMCL1P1Q8NEA9 526 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 COPS5Q92905 334 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 WNT8BQ93098 351 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 TRERF1Q96PN7 1200 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 IRF2BPLQ9H1B7 796 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 TLR9Q9NR96 1032 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 NOD1Q9Y239 953 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 FAM208BQ5VWN6 2430 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 FASNP49327 2511 aaKnown RBP8.34□□□□□ -1.07
VCAN-206ENST00000505615 TTC3P53804 2025 aa8.34□□□□□ -1.07
VCAN-206ENST00000505615 LINC01565O15544 149 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 NCK2O43639 380 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 KPNA6O60684 536 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 EYA4O95677 639 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
VCAN-206ENST00000505615 ALAS1P13196 640 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 TRIM27P14373 513 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 CTHP32929 405 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 ADD2P35612 726 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 GRM5P41594 1212 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 RARSP54136 660 aaKnown RBP8.33□□□□□ -1.08
VCAN-206ENST00000505615 KCNMA1Q12791 1236 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 IKBKEQ14164 716 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 RPAP2Q8IXW5 612 aaPredicted RBP8.33□□□□□ -1.08
VCAN-206ENST00000505615 TMEM192Q8IY95 271 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 MYOCDQ8IZQ8 938 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 FAM9BQ8IZU0 186 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 LRRC47Q8N1G4 583 aaKnown RBP8.33□□□□□ -1.08
VCAN-206ENST00000505615 MEIOBQ8N635 442 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 KAT2BQ92831 832 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 MKL1Q969V6 931 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 MSLNLQ96KJ4 702 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 CLIP2Q9UDT6 1046 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 CD207Q9UJ71 328 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 PLIN4Q96Q06 1357 aa8.33□□□□□ -1.08
VCAN-206ENST00000505615 RAD50Q92878 1312 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 LOC102724159A0A0B4J2E5 919 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 TMEM232C9JQI7 657 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 GOLIM4O00461 696 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 NKRFO15226 690 aaKnown RBP eCLIP8.32□□□□□ -1.08
VCAN-206ENST00000505615 PPFIA3O75145 1194 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 ARIH2O95376 493 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 PDGFBP01127 241 aaPredicted RBP8.32□□□□□ -1.08
VCAN-206ENST00000505615 BMP3P12645 472 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 PDIA4P13667 645 aaKnown RBP8.32□□□□□ -1.08
VCAN-206ENST00000505615 STAT2P52630 851 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 SNAP25P60880 206 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 PPP2R5BQ15173 497 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 PWP2Q15269 919 aaKnown RBP8.32□□□□□ -1.08
VCAN-206ENST00000505615 ZNF618Q5T7W0 954 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 SLFN13Q68D06 897 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 NSMFQ6X4W1 530 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 AACSQ86V21 672 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 AMOTL1Q8IY63 956 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 CEP95Q96GE4 821 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 MTMR4Q9NYA4 1195 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 SYNPO2Q9UMS6 1093 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 PCDHB15Q9Y5E8 787 aa8.32□□□□□ -1.08
VCAN-206ENST00000505615 FANCMQ8IYD8 2048 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 C5orf67F2Z3F1 127 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 SPTLC1O15269 473 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 GRM6O15303 877 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 MAN1A2O60476 641 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 PLA2G6O60733 806 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms