RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 NR3C2P08235 984 aa18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 HOXD8P13378 290 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 HOXA13P31271 388 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 BMPR1AP36894 532 aa18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 ZXDAP98168 799 aa18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 GRM4Q14833 912 aa18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 PIBF1Q8WXW3 757 aa18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 APBB2Q92870 758 aa18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 PIGSQ96S52 555 aa18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 FAM86C1Q9NVL1 165 aa18.52■□□□□ 0.56
PDLIM7-213ENST00000505074 PALM3A6NDB9 673 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-213ENST00000505074 PPP1R11O60927 126 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-213ENST00000505074 CAND2O75155 1236 aa18.51■□□□□ 0.55
PDLIM7-213ENST00000505074 GTF2F1P35269 517 aaKnown RBP eCLIP18.51■□□□□ 0.554e-6■□□□□ 10.7
PDLIM7-213ENST00000505074 NDUFV1P49821 464 aa18.51■□□□□ 0.55
PDLIM7-213ENST00000505074 HSD17B4P51659 736 aa18.51■□□□□ 0.55
PDLIM7-213ENST00000505074 TRAF1Q13077 416 aa18.51■□□□□ 0.55
PDLIM7-213ENST00000505074 ADAM15Q13444 863 aa18.51■□□□□ 0.55
PDLIM7-213ENST00000505074 CATIPQ7Z7H3 387 aa18.51■□□□□ 0.55
PDLIM7-213ENST00000505074 PPP2R3CQ969Q6 453 aa18.51■□□□□ 0.55
PDLIM7-213ENST00000505074 BAZ2BQ9UIF8 2168 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 OPLAHO14841 1288 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 LINC01565O15544 149 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 SGSM2O43147 1006 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 CTSHP09668 335 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 HSDL1Q3SXM5 330 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 MYSM1Q5VVJ2 828 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 KCNV1Q6PIU1 500 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 FCHSD1Q86WN1 690 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 ATOH1Q92858 354 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 SPATA33Q96N06 139 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 SENP2Q9HC62 589 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 TAF6LQ9Y6J9 622 aa18.5■□□□□ 0.55
PDLIM7-213ENST00000505074 ZDBF2Q9HCK1 2354 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 LOC730098B7Z3J9 87 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 GCOM1H8Y6P7 765 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 TREHO43280 583 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 EYA4O95677 639 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 MMP1P03956 469 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 POLR2MP0CAP2 368 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 SIGLEC14Q08ET2 396 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 CELF3Q5SZQ8 465 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 MTMR8Q96EF0 704 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 MSLNLQ96KJ4 702 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 PDCD2LQ9BRP1 358 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 C16orf70Q9BSU1 422 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 RBM8AQ9Y5S9 174 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 ADGRA3Q8IWK6 1321 aa18.49■□□□□ 0.55
PDLIM7-213ENST00000505074 PLXNA3P51805 1871 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 H3BRB1 525 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 CSPG5O95196 566 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 GGPS1O95749 300 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 CCND2P30279 289 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 PGM5Q15124 567 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 STOX1Q6ZVD7 989 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 CLP1Q92989 425 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 ZFP91Q96JP5 570 aaPredicted RBP18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 OSBPL7Q9BZF2 842 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 TUT1Q9H6E5 874 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 MAP3K20Q9NYL2 800 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 KAT6AQ92794 2004 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 CFAP54Q96N23 3096 aa18.48■□□□□ 0.55
PDLIM7-213ENST00000505074 PNMA6FA0A0J9YX94 578 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 LINC00271P0C7V0 271 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 HOXC8P31273 242 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 NFXL1Q6ZNB6 911 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 IL31RAQ8NI17 732 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 CTCFLQ8NI51 663 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 PLVAPQ9BX97 442 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 RNPEPQ9H4A4 650 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 RIOX1Q9H6W3 641 aa18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 ALG13Q9NP73 1137 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-213ENST00000505074 GNAT1P11488 350 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 AVPR2P30518 371 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 VCPP55072 806 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 TROAPQ12815 778 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 BTG3Q14201 252 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 CBX2Q14781 532 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 SLC35G1Q2M3R5 365 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 SAMD3Q8N6K7 520 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 SMRP1Q8NCR6 262 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 MAP4K1Q92918 833 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 MYL10Q9BUA6 226 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 MLXIPQ9HAP2 919 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 KIAA1671Q9BY89 1806 aa18.46■□□□□ 0.55
PDLIM7-213ENST00000505074 CYTH3O43739 400 aa18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 ANTXR2P58335 489 aa18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 GHRHRQ02643 423 aa18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 COASYQ13057 564 aa18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 VSIG10LQ86VR7 867 aa18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 MB21D2Q8IYB1 491 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 ZNF654Q8IZM8 581 aa18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 EFHBQ8N7U6 833 aa18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 P2RX5Q93086 422 aa18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 CLEC1BQ9P126 229 aa18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 SEC63Q9UGP8 760 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-213ENST00000505074 PLAGL2Q9UPG8 496 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms