RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 PUM1Q14671 1186 aaKnown RBP eCLIP7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 ZNF827Q17R98 1081 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 PRAMEF18Q5VWM3 479 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 RSPO2Q6UXX9 243 aaPredicted RBP7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 OTOP3Q7RTS5 596 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 PHOSPHO1Q8TCT1 267 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 C8orf49Q96NF6 230 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 AARSD1Q9BTE6 412 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 CROTQ9UKG9 612 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 SYNJ2O15056 1496 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 SNAPC4Q5SXM2 1469 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 ARHGAP35Q9NRY4 1499 aa7.35□□□□□ -1.23
DEPDC1B-203ENST00000505017 AGRPO00253 132 aa7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 CYP4F22Q6NT55 531 aa7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 TTLL11Q8NHH1 800 aa7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 IGDCC4Q8TDY8 1250 aa7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 SAMD11Q96NU1 681 aa7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 CLIC6Q96NY7 704 aa7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 PTPN18Q99952 460 aa7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 C1QTNF3Q9BXJ4 246 aa7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 CCDC9Q9Y3X0 531 aaKnown RBP7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 ARAP1Q96P48 1450 aa7.34□□□□□ -1.23
DEPDC1B-203ENST00000505017 GRIN2AQ12879 1464 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 ZNF20P17024 532 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 TUSC3Q13454 348 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 STYK1Q6J9G0 422 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 DTX3Q8N9I9 347 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 DCAF4Q8WV16 495 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 TMEM209Q96SK2 561 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 KCNJ15Q99712 375 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 PDGFDQ9GZP0 370 aaPredicted RBP7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 MYRFQ9Y2G1 1151 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 SAMD9Q5K651 1589 aa7.33□□□□□ -1.24
DEPDC1B-203ENST00000505017 TCRBV5S4A2TA0A5A2 114 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 KLHL18O94889 574 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 TNFRSF1AP19438 455 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 GRK2P25098 689 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 GRK3P35626 688 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 CDSNQ15517 529 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 BORAQ6PGQ7 559 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 NSMFQ6X4W1 530 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 SPATC1Q76KD6 591 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 ST13P5Q8NFI4 369 aaPredicted RBP7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 NUDT10Q8NFP7 164 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 UHMK1Q8TAS1 419 aaKnown RBP7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 SH3RF2Q8TEC5 729 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 NUDT11Q96G61 164 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 L2HGDHQ9H9P8 463 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 ST6GALNAC2Q9UJ37 374 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 IQGAP2Q13576 1575 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 MAP3K1Q13233 1512 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 KIAA0586Q9BVV6 1533 aa7.32□□□□□ -1.24
DEPDC1B-203ENST00000505017 ACOT7O00154 380 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 GPR42O15529 346 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 ADCY3O60266 1144 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 ICAM4Q14773 271 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 FOXB2Q5VYV0 432 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 FAM124AQ86V42 546 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 TTC9BQ8N6N2 239 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 LOXL4Q96JB6 756 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 GPR20Q99678 358 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 TMEM168Q9H0V1 697 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 CD248Q9HCU0 757 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 R3HCC1Q9Y3T6 440 aaKnown RBP7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 UGGT2Q9NYU1 1516 aa7.31□□□□□ -1.24
DEPDC1B-203ENST00000505017 NUP160Q12769 1436 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 C1QTNF3-AMACRE9PGA6 284 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 KRIT1O00522 736 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 MATN3O15232 486 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 LAMTOR5O43504 91 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 CYP1A1P04798 512 aaPredicted RBP7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 CKMP06732 381 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 FAHP16930 419 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 RBM25P49756 843 aaKnown RBP7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 EPHA5P54756 1037 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 GPR85P60893 370 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 PAN2Q504Q3 1202 aaKnown RBP7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 CPZQ66K79 652 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 KBTBD2Q8IY47 623 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 WWC2-AS2Q96NR7 200 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 TRAF6Q9Y4K3 522 aa7.3□□□□□ -1.24
DEPDC1B-203ENST00000505017 ZNF536O15090 1300 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 FMN1Q68DA7 1419 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 IL18BPO95998 194 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 KNG1P01042 644 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 NFATC3Q12968 1075 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 KIZQ2M2Z5 673 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 TRMT10BQ6PF06 316 aaKnown RBP7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 TRIM48Q8IWZ4 208 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 DNERQ8NFT8 737 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 MEGF9Q9H1U4 602 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 TMPRSS5Q9H3S3 457 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 IPPKQ9H8X2 491 aa7.29□□□□□ -1.24
DEPDC1B-203ENST00000505017 TRAV20A0A0B4J274 112 aa7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 IQCA1LA6NCM1 817 aa7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 MAFKO60675 156 aa7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 SOD2P04179 222 aa7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 EPHB4P54760 987 aa7.28□□□□□ -1.24
DEPDC1B-203ENST00000505017 CD276Q5ZPR3 534 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms