RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 NFRKBQ6P4R8 1299 aa22.91■■□□□ 1.26
HERC6-205ENST00000504905 ZNF577Q9BSK1 485 aa22.91■■□□□ 1.26
HERC6-205ENST00000504905 PDLIM7Q9NR12 457 aa22.91■■□□□ 1.26
HERC6-205ENST00000504905 TELO2Q9Y4R8 837 aa22.91■■□□□ 1.26
HERC6-205ENST00000504905 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.91■■□□□ 1.26
HERC6-205ENST00000504905 VCANP13611 3396 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 LGALS2P05162 132 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 PSEN2P49810 448 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 SMAD3P84022 425 aaKnown RBP22.9■■□□□ 1.26
HERC6-205ENST00000504905 MFSD10Q14728 455 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 LETM2Q2VYF4 491 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 MOXD1Q6UVY6 613 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 NEK8Q86SG6 692 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 FAM126BQ8IXS8 530 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 FBXO18Q8NFZ0 1043 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 SEPT1Q8WYJ6 367 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 BADQ92934 168 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 TNFRSF25Q93038 417 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 LENG9Q96B70 501 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 UIMC1Q96RL1 719 aa22.9■■□□□ 1.26
HERC6-205ENST00000504905 CYP3A7-CYP3A51PA0A087WV96 503 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 DDX39AO00148 427 aaKnown RBP22.89■■□□□ 1.25
HERC6-205ENST00000504905 TDP2O95551 362 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 CYP3A7P24462 503 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 TCF7P36402 384 aaPredicted RBP22.89■■□□□ 1.25
HERC6-205ENST00000504905 FAAP100Q0VG06 881 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 KIAA0753Q2KHM9 967 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 UTP14CQ5TAP6 766 aaKnown RBP22.89■■□□□ 1.25
HERC6-205ENST00000504905 PPP1R13LQ8WUF5 828 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 C16orf70Q9BSU1 422 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 TBC1D22BQ9NU19 505 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 TMEM39AQ9NV64 488 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 SMC3Q9UQE7 1217 aa22.89■■□□□ 1.25
HERC6-205ENST00000504905 H3BRB1 525 aa22.88■■□□□ 1.25
HERC6-205ENST00000504905 GJB2P29033 226 aa22.88■■□□□ 1.25
HERC6-205ENST00000504905 PTPN11Q06124 597 aaPredicted RBP22.88■■□□□ 1.25
HERC6-205ENST00000504905 Q4G0T1 1027 aa22.88■■□□□ 1.25
HERC6-205ENST00000504905 EARS2Q5JPH6 523 aaKnown RBP22.88■■□□□ 1.25
HERC6-205ENST00000504905 SH3RF1Q7Z6J0 888 aa22.88■■□□□ 1.25
HERC6-205ENST00000504905 NAP1L4Q99733 375 aaKnown RBP22.88■■□□□ 1.25
HERC6-205ENST00000504905 TUT1Q9H6E5 874 aaKnown RBP22.88■■□□□ 1.25
HERC6-205ENST00000504905 DDX25Q9UHL0 483 aaKnown RBP22.88■■□□□ 1.25
HERC6-205ENST00000504905 TCEAL9Q9UHQ7 104 aa22.88■■□□□ 1.25
HERC6-205ENST00000504905 ZNF215Q9UL58 517 aaPredicted RBP22.88■■□□□ 1.25
HERC6-205ENST00000504905 GSTTP1A0A1W2PQM5 241 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 TRIM43BA6NCK2 446 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 FAM205CA6NFA0 338 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 HAS3O00219 553 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 MSH4O15457 936 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 B4GALT4O60513 344 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 CD4P01730 458 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 GCFC2P16383 781 aaKnown RBP22.87■■□□□ 1.25
HERC6-205ENST00000504905 ACTR2P61160 394 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 GNL2Q13823 731 aaKnown RBP22.87■■□□□ 1.25
HERC6-205ENST00000504905 TRIM50Q86XT4 487 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 C7orf31Q8N865 590 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 MAFAQ8NHW3 353 aaPredicted RBP22.87■■□□□ 1.25
HERC6-205ENST00000504905 TRIM43Q96BQ3 446 aaPredicted RBP22.87■■□□□ 1.25
HERC6-205ENST00000504905 MBOAT7Q96N66 472 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 TRPV6Q9H1D0 765 aa22.87■■□□□ 1.25
HERC6-205ENST00000504905 SPTBN5Q9NRC6 3674 aaKnown RBP22.86■■□□□ 1.25
HERC6-205ENST00000504905 PRUNE2Q8WUY3 3088 aa22.86■■□□□ 1.25
HERC6-205ENST00000504905 DHX15O43143 795 aaKnown RBP22.86■■□□□ 1.25
HERC6-205ENST00000504905 CCNT1O60563 726 aaKnown RBP22.86■■□□□ 1.25
HERC6-205ENST00000504905 CUL4AQ13619 759 aa22.86■■□□□ 1.25
HERC6-205ENST00000504905 SESTD1Q86VW0 696 aa22.86■■□□□ 1.25
HERC6-205ENST00000504905 TTYH1Q9H313 450 aaPredicted RBP22.86■■□□□ 1.25
HERC6-205ENST00000504905 K7ELQ4 463 aaPredicted RBP22.85■■□□□ 1.25
HERC6-205ENST00000504905 KIAA0355O15063 1070 aa22.85■■□□□ 1.25
HERC6-205ENST00000504905 SUPT20HL2P0C7V6 817 aa22.85■■□□□ 1.25
HERC6-205ENST00000504905 PPP4R3AQ6IN85 833 aa22.85■■□□□ 1.25
HERC6-205ENST00000504905 GLG1Q92896 1179 aa22.85■■□□□ 1.25
HERC6-205ENST00000504905 FOXP1Q9H334 677 aaPredicted RBP22.85■■□□□ 1.25
HERC6-205ENST00000504905 TRMT13Q9NUP7 481 aaKnown RBP22.85■■□□□ 1.25
HERC6-205ENST00000504905 HDAC6Q9UBN7 1215 aa22.85■■□□□ 1.25
HERC6-205ENST00000504905 TBX21Q9UL17 535 aa22.85■■□□□ 1.25
HERC6-205ENST00000504905 SLC37A4O43826 429 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 GAS7O60861 476 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 CCNE2O96020 404 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 RAG1P15918 1043 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 KRT76Q01546 638 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 LRCH2Q5VUJ6 765 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 ZNF746Q6NUN9 644 aaPredicted RBP22.84■■□□□ 1.25
HERC6-205ENST00000504905 MYLIPQ8WY64 445 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 SLC5A5Q92911 643 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 SNX21Q969T3 373 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 RIT2Q99578 217 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 SMARCAD1Q9H4L7 1026 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 AZI2Q9H6S1 392 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 GTF2IRD1Q9UHL9 959 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 NOD1Q9Y239 953 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 KAT6AQ92794 2004 aa22.84■■□□□ 1.25
HERC6-205ENST00000504905 EMSYQ7Z589 1322 aa22.83■■□□□ 1.25
HERC6-205ENST00000504905 LGR5O75473 907 aa22.83■■□□□ 1.25
HERC6-205ENST00000504905 GDF6Q6KF10 455 aaPredicted RBP22.83■■□□□ 1.25
HERC6-205ENST00000504905 TEKT3Q9BXF9 490 aa22.83■■□□□ 1.25
HERC6-205ENST00000504905 ERAP1Q9NZ08 941 aa22.83■■□□□ 1.25
HERC6-205ENST00000504905 CDH23Q9H251 3354 aa22.83■■□□□ 1.24
HERC6-205ENST00000504905 MYH9P35579 1960 aaKnown RBP22.82■■□□□ 1.24
HERC6-205ENST00000504905 TRIP12Q14669 1992 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms