RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CUEDC2Q9H467 287 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 MAGEF1Q9HAY2 307 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 RGL1Q9NZL6 768 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 PKD2L1Q9P0L9 805 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 CCDC39Q9UFE4 941 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 STK24Q9Y6E0 443 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 KDM3AQ9Y4C1 1321 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 MYMKA6NI61 221 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 E9PMD0 336 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 EIF3JO75822 258 aaKnown RBP11.66□□□□□ -0.54
TPM3-217ENST00000504663 SLITRK3O94933 977 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 UBA1P22314 1058 aaKnown RBP11.66□□□□□ -0.54
TPM3-217ENST00000504663 CCT6AP40227 531 aaKnown RBP11.66□□□□□ -0.54
TPM3-217ENST00000504663 SLC12A3P55017 1021 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 NLRP12P59046 1061 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 EHHADHQ08426 723 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 MCM6Q14566 821 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 KCTD2Q14681 263 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 EPHA7Q15375 998 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 STXBP2Q15833 593 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 UGCGQ16739 394 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 ANO6Q4KMQ2 910 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 TMEM63BQ5T3F8 832 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 KANK3Q6NY19 840 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 MAMDC4Q6UXC1 1216 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 PLEKHH3Q7Z736 793 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 NPLOC4Q8TAT6 608 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 DYDC2Q96IM9 177 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 CAPNS2Q96L46 248 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 MED15Q96RN5 788 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 C7orf25Q9BPX7 421 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 TRIM9Q9C026 710 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 DNAJC25Q9H1X3 360 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 BLZF1Q9H2G9 400 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 ADD3Q9UEY8 706 aaKnown RBP11.66□□□□□ -0.54
TPM3-217ENST00000504663 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
TPM3-217ENST00000504663 DDX39AO00148 427 aaKnown RBP11.65□□□□□ -0.54
TPM3-217ENST00000504663 BIN1O00499 593 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 MAFGO15525 162 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 CA12O43570 354 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 CHMP2AO43633 222 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 STRNO43815 780 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 STBD1O95210 358 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 CCDC192P0DO97 292 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 MAPK4P31152 587 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 NOGQ13253 232 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 IQCB1Q15051 598 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 STX1AQ16623 288 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 HAUS3Q68CZ6 603 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 CCDC62Q6P9F0 684 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
TPM3-217ENST00000504663 NLRX1Q86UT6 975 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 CEP57L1Q8IYX8 460 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 LARP4BQ92615 738 aaKnown RBP11.65□□□□□ -0.54
TPM3-217ENST00000504663 DNAJC19Q96DA6 116 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 CALML4Q96GE6 196 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 TUFT1Q9NNX1 390 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 TBC1D22BQ9NU19 505 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 KIAA1024Q9UPX6 916 aa11.65□□□□□ -0.54
TPM3-217ENST00000504663 SYNGAP1Q96PV0 1343 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 IGSF9BQ9UPX0 1349 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 RBM47A0AV96 593 aaKnown RBP11.64□□□□□ -0.55
TPM3-217ENST00000504663 SLC15A5A6NIM6 579 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 ZBTB39O15060 712 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 FARP2O94887 1054 aaPredicted RBP11.64□□□□□ -0.55
TPM3-217ENST00000504663 ATG7O95352 703 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 LYPLA2O95372 231 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 SNAI1O95863 264 aaPredicted RBP11.64□□□□□ -0.55
TPM3-217ENST00000504663 HOXC6P09630 235 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
TPM3-217ENST00000504663 MUTP22033 750 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 PTGS1P23219 599 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 CYP4A11Q02928 519 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 CTTNQ14247 550 aaKnown RBP11.64□□□□□ -0.55
TPM3-217ENST00000504663 ZRSR1Q15695 479 aaKnown RBP11.64□□□□□ -0.55
TPM3-217ENST00000504663 ARSHQ5FYA8 562 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 WDR78Q5VTH9 848 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 ZNF746Q6NUN9 644 aaPredicted RBP11.64□□□□□ -0.55
TPM3-217ENST00000504663 TAPT1Q6NXT6 567 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 ARMCX2Q7L311 632 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 FBXO16Q8IX29 292 aaPredicted RBP11.64□□□□□ -0.55
TPM3-217ENST00000504663 MAML3Q96JK9 1138 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 LXNQ9BS40 222 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 CFHR5Q9BXR6 569 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 NT5C3AQ9H0P0 336 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 HSD3B7Q9H2F3 369 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 GRPEL1Q9HAV7 217 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 CBX8Q9HC52 389 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 GJD2Q9UKL4 321 aa11.64□□□□□ -0.55
TPM3-217ENST00000504663 DIS3Q9Y2L1 958 aaKnown RBP11.64□□□□□ -0.55
TPM3-217ENST00000504663 IGKV6D-21A0A0A0MT36 114 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 FRMD3A2A2Y4 597 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 GOLGA6L3A6NEY3 463 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 AP5Z1O43299 807 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 ADCY6O43306 1168 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 MARCH6O60337 910 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 MYL1P05976 194 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 PLA2G4BP0C869 781 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 CYP11B2P19099 503 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 HTRA3P83110 453 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms