RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SMIM10L2AP0DMW4 78 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 SMIM10L2BP0DMW5 78 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 ITGB5P18084 799 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 HSPA4P34932 840 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 RCAN1P53805 252 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 SP4Q02446 784 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 RBL2Q08999 1139 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 SEMA3FQ13275 785 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 GRB10Q13322 594 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 MTMR1Q13613 665 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 UBE2SQ16763 222 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 ZNF618Q5T7W0 954 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 CNKSR3Q6P9H4 555 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 BLOC1S2Q6QNY1 142 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 Q6ZUG5 572 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 TMCO2Q7Z6W1 182 aaPredicted RBP13.69□□□□□ -0.22
MED28-203ENST00000503945 DHX38Q92620 1227 aaKnown RBP13.69□□□□□ -0.22
MED28-203ENST00000503945 KCNB2Q92953 911 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 JAKMIP1Q96N16 626 aaKnown RBP13.69□□□□□ -0.22
MED28-203ENST00000503945 RIC8AQ9NPQ8 531 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 JADE2Q9NQC1 790 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 UBIAD1Q9Y5Z9 338 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 hCG_1984214I3L0E3 225 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 TLL1O43897 1013 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 LPXNO60711 386 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 NBNO60934 754 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 EFCAB14O75071 495 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 CXCL10P02778 98 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
MED28-203ENST00000503945 TCTN1Q2MV58 587 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 WWC2Q6AWC2 1192 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 SERINC5Q86VE9 423 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 ZNF713Q8N859 430 aaPredicted RBP13.68□□□□□ -0.22
MED28-203ENST00000503945 SETD4Q9NVD3 440 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 XIRP2A4UGR9 3374 aa13.68□□□□□ -0.22
MED28-203ENST00000503945 EMSYQ7Z589 1322 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 LCHNA4D1U4 455 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 TREHO43280 583 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 CPA1P15085 419 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 TCF7P36402 384 aaPredicted RBP13.67□□□□□ -0.22
MED28-203ENST00000503945 ZNF76P36508 570 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 METAP2P50579 478 aaKnown RBP eCLIP13.67□□□□□ -0.22
MED28-203ENST00000503945 ADCY7P51828 1080 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 WDR5P61964 334 aaKnown RBP13.67□□□□□ -0.22
MED28-203ENST00000503945 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
MED28-203ENST00000503945 FUT2Q10981 343 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 HIC1Q14526 733 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 TRIM71Q2Q1W2 868 aaKnown RBP13.67□□□□□ -0.22
MED28-203ENST00000503945 GLG1Q92896 1179 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
MED28-203ENST00000503945 BRF1Q92994 677 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 MXRA8Q9BRK3 442 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 SMARCAD1Q9H4L7 1026 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 EPHX3Q9H6B9 360 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
MED28-203ENST00000503945 BARHL2Q9NY43 387 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 PKD2L1Q9P0L9 805 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 COG5Q9UP83 839 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
MED28-203ENST00000503945 NRCAMQ92823 1304 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 LGR5O75473 907 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 KCNA2P16389 499 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 CDC27P30260 824 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 DEFB103AP81534 67 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 APOBRQ0VD83 1088 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 PPP1R18Q6NYC8 613 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 FBXL16Q8N461 479 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 WNT8BQ93098 351 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 C1QTNF1Q9BXJ1 281 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 KCNH7Q9NS40 1196 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 ERAP1Q9NZ08 941 aa13.66□□□□□ -0.22
MED28-203ENST00000503945 GSTTP1A0A1W2PQM5 241 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 STXBP3O00186 592 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.22
MED28-203ENST00000503945 EPB41L2O43491 1005 aaKnown RBP13.65□□□□□ -0.22
MED28-203ENST00000503945 CAND2O75155 1236 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 HOXC8P31273 242 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 ARHGAP4P98171 946 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.22
MED28-203ENST00000503945 CEP55Q53EZ4 464 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 MCTP2Q6DN12 878 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 DBF4BQ8NFT6 615 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 CYP2W1Q8TAV3 490 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 CCDC12Q8WUD4 166 aaPredicted RBP13.65□□□□□ -0.22
MED28-203ENST00000503945 HLA-CQ95604 372 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 RAD9AQ99638 391 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 SDF4Q9BRK5 362 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 AZI2Q9H6S1 392 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 C6orf50Q9HD87 102 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 TELO2Q9Y4R8 837 aa13.65□□□□□ -0.22
MED28-203ENST00000503945 CNTNAP5Q8WYK1 1306 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 SCG2P13521 617 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 GNA11P29992 359 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 AP3B2Q13367 1082 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 TYW1BQ6NUM6 668 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 TRAF7Q6Q0C0 670 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 RSPH3Q86UC2 560 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 TRIM50Q86XT4 487 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms