RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 HDAC6Q9UBN7 1215 aa20.68■□□□□ 0.9
PDLIM7-209ENST00000503346 GTF2IRD1Q9UHL9 959 aa20.68■□□□□ 0.9
PDLIM7-209ENST00000503346 ZNF215Q9UL58 517 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-209ENST00000503346 BTBD18B2RXH4 712 aa20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 MSH4O15457 936 aa20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 LGR5O75473 907 aa20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 CCNE2O96020 404 aa20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 TIMP1P01033 207 aa20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 RAG1P15918 1043 aa20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 MDM2Q00987 491 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 SAFBQ15424 915 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 UTP14CQ5TAP6 766 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 PPP4R3AQ6IN85 833 aa20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 TRIM50Q86XT4 487 aa20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 FBXO18Q8NFZ0 1043 aa20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 COLQQ9Y215 455 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-209ENST00000503346 ATG7O95352 703 aa20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 GCFC2P16383 781 aaKnown RBP20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 GUCY1B3Q02153 619 aa20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 LETM2Q2VYF4 491 aa20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 GDF6Q6KF10 455 aaPredicted RBP20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 SLC5A5Q92911 643 aa20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 BADQ92934 168 aa20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 NAP1L4Q99733 375 aaKnown RBP20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 NOC4LQ9BVI4 516 aaKnown RBP20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 EMSYQ7Z589 1322 aa20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 MYH7BA7E2Y1 1941 aa20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 CEP290O15078 2479 aa20.66■□□□□ 0.9
PDLIM7-209ENST00000503346 FAM205CA6NFA0 338 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 DDX39AO00148 427 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 HOXC8P31273 242 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 PTGISQ16647 500 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 ZNF746Q6NUN9 644 aaPredicted RBP20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 UIMC1Q96RL1 719 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 CTAGE1Q96RT6 745 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 PCYT2Q99447 389 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 RIT2Q99578 217 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 HIPK3Q9H422 1215 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 SMARCAD1Q9H4L7 1026 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 ERAP1Q9NZ08 941 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 DDX25Q9UHL0 483 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 KIF3AQ9Y496 699 aa20.65■□□□□ 0.9
PDLIM7-209ENST00000503346 IGKV6D-21A0A0A0MT36 114 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 SMIM10L2AP0DMW4 78 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 SMIM10L2BP0DMW5 78 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 CYP2C9P11712 490 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 KRT76Q01546 638 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 CUL4AQ13619 759 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 MFSD5Q6N075 450 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 ABHD15Q6UXT9 468 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 ETNPPLQ8TBG4 499 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 GLG1Q92896 1179 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 FOXP1Q9H334 677 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 NOD1Q9Y239 953 aa20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-209ENST00000503346 A0A1W2PPC1 479 aa20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 SLC37A4O43826 429 aa20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 CCNT1O60563 726 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 HIC1Q14526 733 aa20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 PLPPR4Q7Z2D5 763 aa20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 SMAP1Q8IYB5 467 aaPredicted RBP20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 PPP1R12CQ9BZL4 782 aa20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 UBE2OQ9C0C9 1292 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 RNPEPQ9H4A4 650 aa20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 AZI2Q9H6S1 392 aa20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 TCEAL9Q9UHQ7 104 aa20.63■□□□□ 0.89
PDLIM7-209ENST00000503346 LTBP2Q14767 1821 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 C17orf102A2RUQ5 167 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 GAS7O60861 476 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 PSMD10O75832 226 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 GJB2P29033 226 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 CYP2C18P33260 490 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 LRCH2Q5VUJ6 765 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 MIS18BP1Q6P0N0 1132 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 AFAP1L1Q8TED9 768 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 TEKT3Q9BXF9 490 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 KCNMB3Q9NPA1 279 aa20.62■□□□□ 0.89
PDLIM7-209ENST00000503346 UMODL1Q5DID0 1318 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 DOCK5Q9H7D0 1870 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 PITPNM1O00562 1244 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 TBX3O15119 743 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 GNAT1P11488 350 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 SLC26A2P50443 739 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 STAT5BP51692 787 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 ZNF200P98182 395 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 FPGSQ05932 587 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 RBL2Q08999 1139 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 PTK7Q13308 1070 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 B3GNT9Q6UX72 402 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 TMEM199Q8N511 208 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 CAGE1Q8TC20 777 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 FAM20AQ96MK3 541 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 SMC3Q9UQE7 1217 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 PCDHA10Q9Y5I2 948 aa20.61■□□□□ 0.89
PDLIM7-209ENST00000503346 NRCAMQ92823 1304 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 WDR64B1ANS9 1081 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 MARK3P27448 753 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 ADAM17P78536 824 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 BFSP2Q13515 415 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 FAM160B1Q5W0V3 765 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms