RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.63■□□□□ 0.57
SCLT1-204ENST00000503215 DBF4BQ8NFT6 615 aa18.63■□□□□ 0.57
SCLT1-204ENST00000503215 LMBR1Q8WVP7 490 aa18.63■□□□□ 0.57
SCLT1-204ENST00000503215 SMCO2A6NFE2 343 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 PPFIA3O75145 1194 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 LGR5O75473 907 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 PARNO95453 639 aaKnown RBP18.62■□□□□ 0.57
SCLT1-204ENST00000503215 CTSHP09668 335 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 ARP10275 920 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 MARK3P27448 753 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 KCNJ6P48051 423 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 MTMR1Q13613 665 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 FAM117BQ6P1L5 589 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 BRF1Q92994 677 aa18.62■□□□□ 0.57
SCLT1-204ENST00000503215 ABHD14A-ACY1A0A1B0GW23 586 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 TLL1O43897 1013 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 HMGB1P09429 215 aaKnown RBP18.61■□□□□ 0.57
SCLT1-204ENST00000503215 ADCY7P51828 1080 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 ARHGAP4P98171 946 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 FGD1P98174 961 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 RUFY4Q6ZNE9 571 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 ARNTL2Q8WYA1 636 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 SEPT1Q8WYJ6 367 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 ZBTB10Q96DT7 871 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 PCYT2Q99447 389 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 MXRA8Q9BRK3 442 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 KCNH7Q9NS40 1196 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 BARHL2Q9NY43 387 aa18.61■□□□□ 0.57
SCLT1-204ENST00000503215 PRRC2BQ5JSZ5 2229 aaKnown RBP18.61■□□□□ 0.57
SCLT1-204ENST00000503215 METAP2P50579 478 aaKnown RBP eCLIP18.6■□□□□ 0.57
SCLT1-204ENST00000503215 MKRN4PQ13434 485 aaPredicted RBP18.6■□□□□ 0.57
SCLT1-204ENST00000503215 IKBKEQ14164 716 aa18.6■□□□□ 0.57
SCLT1-204ENST00000503215 BLOC1S2Q6QNY1 142 aa18.6■□□□□ 0.57
SCLT1-204ENST00000503215 MICALL1Q8N3F8 863 aa18.6■□□□□ 0.57
SCLT1-204ENST00000503215 GIMAP8Q8ND71 665 aaPredicted RBP18.6■□□□□ 0.57
SCLT1-204ENST00000503215 CDHR1Q96JP9 859 aa18.6■□□□□ 0.57
SCLT1-204ENST00000503215 UIMC1Q96RL1 719 aa18.6■□□□□ 0.57
SCLT1-204ENST00000503215 ANO3Q9BYT9 981 aa18.6■□□□□ 0.57
SCLT1-204ENST00000503215 ZNF215Q9UL58 517 aaPredicted RBP18.6■□□□□ 0.57
SCLT1-204ENST00000503215 TTC28Q96AY4 2481 aa18.6■□□□□ 0.57
SCLT1-204ENST00000503215 REV3LO60673 3130 aa18.59■□□□□ 0.57
SCLT1-204ENST00000503215 KIF28PB7ZC32 967 aa18.59■□□□□ 0.57
SCLT1-204ENST00000503215 RPS6KB1P23443 525 aa18.59■□□□□ 0.57
SCLT1-204ENST00000503215 CLK2P49760 499 aaKnown RBP18.59■□□□□ 0.57
SCLT1-204ENST00000503215 PKN1Q16512 942 aa18.59■□□□□ 0.57
SCLT1-204ENST00000503215 PLEKHG4Q58EX7 1191 aa18.59■□□□□ 0.57
SCLT1-204ENST00000503215 JAKMIP3Q5VZ66 844 aa18.59■□□□□ 0.57
SCLT1-204ENST00000503215 PPP1R18Q6NYC8 613 aa18.59■□□□□ 0.57
SCLT1-204ENST00000503215 ZBED2Q9BTP6 218 aa18.59■□□□□ 0.57
SCLT1-204ENST00000503215 GJB5O95377 273 aa18.58■□□□□ 0.57
SCLT1-204ENST00000503215 CHRNA1P02708 482 aa18.58■□□□□ 0.57
SCLT1-204ENST00000503215 RCAN1P53805 252 aa18.58■□□□□ 0.57
SCLT1-204ENST00000503215 ITGB3BPQ13352 177 aaPredicted RBP18.58■□□□□ 0.57
SCLT1-204ENST00000503215 PFKFB3Q16875 520 aaPredicted RBP18.58■□□□□ 0.57
SCLT1-204ENST00000503215 MARCH8Q5T0T0 291 aa18.58■□□□□ 0.57
SCLT1-204ENST00000503215 GLG1Q92896 1179 aa18.58■□□□□ 0.57
SCLT1-204ENST00000503215 PHKBQ93100 1093 aa18.58■□□□□ 0.57
SCLT1-204ENST00000503215 MTCH2Q9Y6C9 303 aa18.58■□□□□ 0.57
SCLT1-204ENST00000503215 LPXNO60711 386 aa18.57■□□□□ 0.56
SCLT1-204ENST00000503215 GNAT1P11488 350 aa18.57■□□□□ 0.56
SCLT1-204ENST00000503215 SCG2P13521 617 aa18.57■□□□□ 0.56
SCLT1-204ENST00000503215 PPFIA1Q13136 1202 aa18.57■□□□□ 0.56
SCLT1-204ENST00000503215 CEP55Q53EZ4 464 aa18.57■□□□□ 0.56
SCLT1-204ENST00000503215 LARP6Q9BRS8 491 aaKnown RBP18.57■□□□□ 0.56
SCLT1-204ENST00000503215 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
SCLT1-204ENST00000503215 EHMT1Q9H9B1 1298 aa18.57■□□□□ 0.56
SCLT1-204ENST00000503215 AGO4Q9HCK5 861 aaKnown RBP18.57■□□□□ 0.56
SCLT1-204ENST00000503215 JPH1Q9HDC5 661 aaPredicted RBP18.57■□□□□ 0.56
SCLT1-204ENST00000503215 EMSYQ7Z589 1322 aa18.57■□□□□ 0.56
SCLT1-204ENST00000503215 NRCAMQ92823 1304 aa18.57■□□□□ 0.56
SCLT1-204ENST00000503215 TRANK1O15050 2925 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 MEIS1O00470 390 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 MAFGO15525 162 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 FOSP01100 380 aaPredicted RBP18.56■□□□□ 0.56
SCLT1-204ENST00000503215 SREBF1P36956 1147 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 GRIK4Q16099 956 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 NTRK3Q16288 839 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 FAM26DQ5JW98 314 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 RAD9AQ99638 391 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 SMARCAD1Q9H4L7 1026 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 NCOA5Q9HCD5 579 aaKnown RBP18.56■□□□□ 0.56
SCLT1-204ENST00000503215 ERAP1Q9NZ08 941 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 SLC9A2Q9UBY0 812 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 MTUS1Q9ULD2 1270 aa18.56■□□□□ 0.56
SCLT1-204ENST00000503215 SPTBN5Q9NRC6 3674 aaKnown RBP18.56■□□□□ 0.56
SCLT1-204ENST00000503215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.55■□□□□ 0.56
SCLT1-204ENST00000503215 FAM86B1E9PN63 330 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 REC8O95072 547 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 CCNE2O96020 404 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 FAM86B2P0C5J1 330 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 ACTR2P61160 394 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 IGBP1P78318 339 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 CCT2P78371 535 aaKnown RBP18.55■□□□□ 0.56
SCLT1-204ENST00000503215 GRB10Q13322 594 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 MYOCDQ8IZQ8 938 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 FBXL16Q8N461 479 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 TRAPPC12Q8WVT3 735 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 SEPT8Q92599 483 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 CCDC196A0A1B0GTZ2 297 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 MBLAC1A4D2B0 266 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms