RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 CYFIP1Q7L576 1253 aa17.09■□□□□ 0.33
MBD4-204ENST00000503197 KCNK18Q7Z418 384 aa17.09■□□□□ 0.33
MBD4-204ENST00000503197 DNAJC5GQ8N7S2 189 aa17.09■□□□□ 0.33
MBD4-204ENST00000503197 CNNM3Q8NE01 707 aa17.09■□□□□ 0.33
MBD4-204ENST00000503197 RASSF8Q8NHQ8 419 aa17.09■□□□□ 0.33
MBD4-204ENST00000503197 SYAP1Q96A49 352 aaPredicted RBP17.09■□□□□ 0.33
MBD4-204ENST00000503197 CALML4Q96GE6 196 aa17.09■□□□□ 0.33
MBD4-204ENST00000503197 ABHD16BQ9H3Z7 469 aa17.09■□□□□ 0.33
MBD4-204ENST00000503197 JPH1Q9HDC5 661 aaPredicted RBP17.09■□□□□ 0.33
MBD4-204ENST00000503197 SLITRK3O94933 977 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 XRCC5P13010 732 aaKnown RBP17.08■□□□□ 0.33
MBD4-204ENST00000503197 STAT6P42226 847 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 MDM2Q00987 491 aaPredicted RBP17.08■□□□□ 0.33
MBD4-204ENST00000503197 CYP4A11Q02928 519 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 EPHA7Q15375 998 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 HAUS3Q68CZ6 603 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 ZNF746Q6NUN9 644 aaPredicted RBP17.08■□□□□ 0.33
MBD4-204ENST00000503197 MIER3Q7Z3K6 550 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 ERMNQ8TAM6 284 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 SCFD2Q8WU76 684 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 MTRQ99707 1265 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 POLR3CQ9BUI4 534 aaPredicted RBP17.08■□□□□ 0.33
MBD4-204ENST00000503197 BLOC1S4Q9NUP1 217 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 SLC9A2Q9UBY0 812 aa17.08■□□□□ 0.33
MBD4-204ENST00000503197 SLC26A4O43511 780 aa17.08■□□□□ 0.32
MBD4-204ENST00000503197 FARP2O94887 1054 aaPredicted RBP17.08■□□□□ 0.32
MBD4-204ENST00000503197 PTGS1P23219 599 aa17.08■□□□□ 0.32
MBD4-204ENST00000503197 CYP2C19P33261 490 aa17.08■□□□□ 0.32
MBD4-204ENST00000503197 MAP2K1Q02750 393 aaPredicted RBP17.08■□□□□ 0.32
MBD4-204ENST00000503197 ACVR2BQ13705 512 aa17.08■□□□□ 0.32
MBD4-204ENST00000503197 RBM43Q6ZSC3 357 aaKnown RBP17.08■□□□□ 0.32
MBD4-204ENST00000503197 ZNF296Q8WUU4 475 aaPredicted RBP17.08■□□□□ 0.32
MBD4-204ENST00000503197 DYDC2Q96IM9 177 aa17.08■□□□□ 0.32
MBD4-204ENST00000503197 PYM1Q9BRP8 204 aaKnown RBP17.08■□□□□ 0.32
MBD4-204ENST00000503197 TNMDQ9H2S6 317 aa17.08■□□□□ 0.32
MBD4-204ENST00000503197 WRAP73Q9P2S5 460 aaPredicted RBP17.08■□□□□ 0.32
MBD4-204ENST00000503197 USP25Q9UHP3 1055 aa17.08■□□□□ 0.32
MBD4-204ENST00000503197 CASP8AP2Q9UKL3 1982 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 KDM3AQ9Y4C1 1321 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 POTEFA5A3E0 1075 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 TXNP10599 105 aaKnown RBP17.07■□□□□ 0.32
MBD4-204ENST00000503197 ADCYAP1R1P41586 468 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 NEDD9Q14511 834 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 TTLL4Q14679 1199 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 PRAMEF19Q5SWL8 479 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 POTEGQ6S5H5 508 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 SH3RF1Q7Z6J0 888 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 GRAMD1CQ8IYS0 662 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 ERCC4Q92889 916 aaPredicted RBP17.07■□□□□ 0.32
MBD4-204ENST00000503197 CDK5RAP3Q96JB5 506 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 KIAA1024Q9UPX6 916 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 STK24Q9Y6E0 443 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 WDR81Q562E7 1941 aa17.07■□□□□ 0.32
MBD4-204ENST00000503197 WDR64B1ANS9 1081 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 GGPS1O95749 300 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 SFNP31947 248 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 ACTR2P61160 394 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 SP4Q02446 784 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 CTTNQ14247 550 aaKnown RBP17.06■□□□□ 0.32
MBD4-204ENST00000503197 CELF3Q5SZQ8 465 aaKnown RBP17.06■□□□□ 0.32
MBD4-204ENST00000503197 GIMAP8Q8ND71 665 aaPredicted RBP17.06■□□□□ 0.32
MBD4-204ENST00000503197 COPS5Q92905 334 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 PAGE5Q96GU1 130 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 TUFT1Q9NNX1 390 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 A0A087WWV3 80 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.06■□□□□ 0.32
MBD4-204ENST00000503197 ADCY6O43306 1168 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 FKTNO75072 461 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 ZNF865P0CJ78 1059 aaPredicted RBP17.06■□□□□ 0.32
MBD4-204ENST00000503197 JAK3P52333 1124 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 PSMC6P62333 389 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 GJC2Q5T442 439 aaPredicted RBP17.06■□□□□ 0.32
MBD4-204ENST00000503197 METTL7BQ6UX53 244 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 SMAP1Q8IYB5 467 aaPredicted RBP17.06■□□□□ 0.32
MBD4-204ENST00000503197 ELOA2Q8IYF1 753 aaPredicted RBP17.06■□□□□ 0.32
MBD4-204ENST00000503197 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 BANK1Q8NDB2 785 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 RDM1Q8NG50 284 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 TRIB2Q92519 343 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 STAMQ92783 540 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 NT5C3AQ9H0P0 336 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 WBP1LQ9NX94 342 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 SRRDQ9UH36 339 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 SAMM50Q9Y512 469 aa17.06■□□□□ 0.32
MBD4-204ENST00000503197 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.05■□□□□ 0.32
MBD4-204ENST00000503197 PRR29P0C7W0 189 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 PNOCQ13519 176 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 CCDC144BQ3MJ40 725 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 ABHD15Q6UXT9 468 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 LXNQ9BS40 222 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 CUEDC2Q9H467 287 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 KBTBD4Q9NVX7 518 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 STK17AQ9UEE5 414 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 ZHX1Q9UKY1 873 aaPredicted RBP17.05■□□□□ 0.32
MBD4-204ENST00000503197 PCDHA10Q9Y5I2 948 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 SYCE3A1L190 88 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 E9PMD0 336 aa17.05■□□□□ 0.32
MBD4-204ENST00000503197 CTAGE5O15320 804 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms