RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 SCG2P13521 617 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 ZNF16P17020 682 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 KRT4P19013 534 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 KRT9P35527 623 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 PDE6BP35913 854 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 CETN2P41208 172 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 POLD2P49005 469 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 MCM2P49736 904 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 SERPINB8P50452 374 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 KPNA1P52294 538 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 GEMIN4P57678 1058 aaKnown RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 BPIFB3P59826 476 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 DSTNP60981 165 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 MRPS35P82673 323 aaKnown RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 RUNX1T1Q06455 604 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 KLC1Q07866 573 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 ACTN3Q08043 901 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 TOMM20Q15388 145 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 CRY1Q16526 586 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 NDUFA5Q16718 116 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 SHROOM1Q2M3G4 852 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 ERCC6LQ2NKX8 1250 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 TNNI3KQ59H18 835 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 COL13A1Q5TAT6 717 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 CCDC62Q6P9F0 684 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 TUBA3EQ6PEY2 450 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 CYP26C1Q6V0L0 522 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 MPRIPQ6WCQ1 1025 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 DBX2Q6ZNG2 339 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 C3orf62Q6ZUJ4 267 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 ZNF365Q70YC5 407 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 HDXQ7Z353 690 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 COL23A1Q86Y22 540 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 FAM186BQ8IYM0 893 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 ARHGAP18Q8N392 663 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 AADATQ8N5Z0 425 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 ZNF713Q8N859 430 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 CNNM3Q8NE01 707 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 TOR1AIP2Q8NFQ8 470 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 LEO1Q8WVC0 666 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 CNKSR1Q969H4 720 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 SH3KBP1Q96B97 665 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 SAMD11Q96NU1 681 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 RBM14Q96PK6 669 aaKnown RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 EYA1Q99502 592 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 PRPF18Q99633 342 aaKnown RBP7.12□□□□□ -1.27
CLCN3-203ENST00000502998 TRIM8Q9BZR9 551 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 TRIM5Q9C035 493 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 SIL1Q9H173 461 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 SERHL2Q9H4I8 314 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 PLEKHA5Q9HAU0 1116 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 ANO10Q9NW15 660 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 MOCS1Q9NZB8 636 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 NDUFA13Q9P0J0 144 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 GIT1Q9Y2X7 761 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 PRKAB1Q9Y478 270 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 FADS3Q9Y5Q0 445 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 C5P01031 1676 aa7.12□□□□□ -1.27
CLCN3-203ENST00000502998 PALLDQ8WX93 1383 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 ITGB4P16144 1822 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 CLRN2A0PK11 232 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 FAM170AA1A519 330 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 TRIM64A6NGJ6 449 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 TRIM64BA6NI03 449 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 A6NJY4 79 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 AKR1B15C9JRZ8 316 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-203ENST00000502998 SPECC1L-ADORA2AF8WAN1 911 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 HAT1O14929 419 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 FIBPO43427 364 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 GRIN3BO60391 1043 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 B4GALT4O60513 344 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 USO1O60763 962 aaKnown RBP7.11□□□□□ -1.27
CLCN3-203ENST00000502998 CDC45O75419 566 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 FBXO21O94952 628 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 CD2BP2O95400 341 aaKnown RBP7.11□□□□□ -1.27
CLCN3-203ENST00000502998 CYP2E1P05181 493 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-203ENST00000502998 GZMAP12544 262 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 PRLRP16471 622 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 HSD17B2P37059 387 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 CTCFP49711 727 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-203ENST00000502998 GPC3P51654 580 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 RARSP54136 660 aaKnown RBP7.11□□□□□ -1.27
CLCN3-203ENST00000502998 EIF4G2P78344 907 aaKnown RBP eCLIP7.11□□□□□ -1.27
CLCN3-203ENST00000502998 KRT83P78385 493 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 ATP2B2Q01814 1243 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 CFAP100Q494V2 611 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 ANKRD39Q53RE8 183 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 CMPK2Q5EBM0 449 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 WDR44Q5JSH3 913 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 CEP78Q5JTW2 689 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 KIAA1614Q5VZ46 1190 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 TSHZ3Q63HK5 1081 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 GRAMD4Q6IC98 578 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 ZNF746Q6NUN9 644 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-203ENST00000502998 PHLDB2Q86SQ0 1253 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 AMIGO3Q86WK7 504 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 ERICH1Q86X53 443 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 TRIM50Q86XT4 487 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 MCF2L2Q86YR7 1114 aa7.11□□□□□ -1.27
CLCN3-203ENST00000502998 SPATA18Q8TC71 538 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms