RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 ORC2Q13416 577 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-228ENST00000498814 NBPF20Q3BBV1 942 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 TRIM60Q495X7 471 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 LRCH2Q5VUJ6 765 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 ZNF746Q6NUN9 644 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-228ENST00000498814 ANKRD33Q7Z3H0 272 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 DPF3Q92784 378 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 TOX2Q96NM4 488 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 TEKT3Q9BXF9 490 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 TCEAL9Q9UHQ7 104 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 MROH7Q68CQ1 1323 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 H3BRB1 525 aa17.59■□□□□ 0.41
CPNE1-228ENST00000498814 WNT7AO00755 349 aa17.59■□□□□ 0.41
CPNE1-228ENST00000498814 LGR5O75473 907 aa17.59■□□□□ 0.41
CPNE1-228ENST00000498814 PSEN2P49810 448 aa17.59■□□□□ 0.41
CPNE1-228ENST00000498814 PTPN11Q06124 597 aaPredicted RBP17.59■□□□□ 0.41
CPNE1-228ENST00000498814 UTP14CQ5TAP6 766 aaKnown RBP17.59■□□□□ 0.41
CPNE1-228ENST00000498814 NFRKBQ6P4R8 1299 aa17.59■□□□□ 0.41
CPNE1-228ENST00000498814 ABHD15Q6UXT9 468 aa17.59■□□□□ 0.41
CPNE1-228ENST00000498814 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
CPNE1-228ENST00000498814 SMAP1Q8IYB5 467 aaPredicted RBP17.59■□□□□ 0.41
CPNE1-228ENST00000498814 HAS1Q92839 578 aa17.59■□□□□ 0.41
CPNE1-228ENST00000498814 TUT1Q9H6E5 874 aaKnown RBP17.59■□□□□ 0.41
CPNE1-228ENST00000498814 ATP11BQ9Y2G3 1177 aa17.59■□□□□ 0.41
CPNE1-228ENST00000498814 EMSYQ7Z589 1322 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 IGKV6D-21A0A0A0MT36 114 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 VPS37CA5D8V6 355 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-228ENST00000498814 BAG4O95429 457 aaKnown RBP17.58■□□□□ 0.4
CPNE1-228ENST00000498814 ATP2B1P20020 1258 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 TOB1P50616 345 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-228ENST00000498814 TLE2Q04725 743 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 BECN1Q14457 450 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 MFSD10Q14728 455 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 KIAA0753Q2KHM9 967 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 TTC38Q5R3I4 469 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 MIS18BP1Q6P0N0 1132 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 B3GNT9Q6UX72 402 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 SESTD1Q86VW0 696 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 SLFN12Q8IYM2 578 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 GJA10Q969M2 543 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 PCYT2Q99447 389 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 SMARCAD1Q9H4L7 1026 aa17.58■□□□□ 0.4
CPNE1-228ENST00000498814 ZNF215Q9UL58 517 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-228ENST00000498814 TRIP12Q14669 1992 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-228ENST00000498814 DCDC2CA8MYV0 355 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 MARCH6O60337 910 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 NEMFO60524 1076 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 SUPT20HL2P0C7V6 817 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 PDIA4P13667 645 aaKnown RBP17.57■□□□□ 0.4
CPNE1-228ENST00000498814 SFNP31947 248 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 MCM7P33993 719 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 CALCRLQ16602 461 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 RILPL1Q5EBL4 403 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 PLPPR4Q7Z2D5 763 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 BRAPQ7Z569 592 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 TRIM50Q86XT4 487 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 FAM126BQ8IXS8 530 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 MTMR9Q96QG7 549 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 UNC45AQ9H3U1 944 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 AZI2Q9H6S1 392 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 PCDHA10Q9Y5I2 948 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 NR2E3Q9Y5X4 410 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 CEP290O15078 2479 aa17.57■□□□□ 0.4
CPNE1-228ENST00000498814 WDR64B1ANS9 1081 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 STX6O43752 255 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 PQBP1O60828 265 aaKnown RBP17.56■□□□□ 0.4
CPNE1-228ENST00000498814 PSAPP07602 524 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 STAT5BP51692 787 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 JAK3P52333 1124 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 CHMP4BP1P59074 171 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 PPP2R5CQ13362 524 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 ZNF174Q15697 407 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 FAM47CQ5HY64 1035 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 C7orf61Q8IZ16 206 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 C7orf31Q8N865 590 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 AFAP1L1Q8TED9 768 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 GLG1Q92896 1179 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 ERAP1Q9NZ08 941 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 VAV3Q9UKW4 847 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 MTMR6Q9Y217 621 aa17.56■□□□□ 0.4
CPNE1-228ENST00000498814 TLR3O15455 904 aaKnown RBP17.55■□□□□ 0.4
CPNE1-228ENST00000498814 CD4P01730 458 aa17.55■□□□□ 0.4
CPNE1-228ENST00000498814 SLC26A2P50443 739 aa17.55■□□□□ 0.4
CPNE1-228ENST00000498814 FAAP100Q0VG06 881 aa17.55■□□□□ 0.4
CPNE1-228ENST00000498814 FAM160B1Q5W0V3 765 aa17.55■□□□□ 0.4
CPNE1-228ENST00000498814 SPRYD3Q8NCJ5 442 aa17.55■□□□□ 0.4
CPNE1-228ENST00000498814 TMEM60Q9H2L4 133 aa17.55■□□□□ 0.4
CPNE1-228ENST00000498814 DISC1Q9NRI5 854 aa17.55■□□□□ 0.4
CPNE1-228ENST00000498814 HDAC6Q9UBN7 1215 aa17.55■□□□□ 0.4
CPNE1-228ENST00000498814 SAMM50Q9Y512 469 aa17.55■□□□□ 0.4
CPNE1-228ENST00000498814 BACH1O14867 736 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 CHMP2AO43633 222 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 CLTBP09497 229 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 SPIRE1Q08AE8 756 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 RESTQ13127 1097 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 NBR1Q14596 966 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 SWSAP1Q6NVH7 229 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 MIER3Q7Z3K6 550 aa17.54■□□□□ 0.4
CPNE1-228ENST00000498814 FERMT3Q86UX7 667 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms