RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 GNG11P61952 73 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 CUL4BQ13620 913 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 C2orf27AQ580R0 203 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 TTC38Q5R3I4 469 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 TBC1D9BQ66K14 1250 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 MMS22LQ6ZRQ5 1243 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 PIK3AP1Q6ZUJ8 805 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 TXNRD3Q86VQ6 643 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 TRIML1Q8N9V2 468 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 FRS2Q8WU20 508 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 PDGFDQ9GZP0 370 aaPredicted RBP9.94□□□□□ -0.82
FN1-227ENST00000498719 MRPL44Q9H9J2 332 aaKnown RBP9.94□□□□□ -0.82
FN1-227ENST00000498719 DCP1AQ9NPI6 582 aaPredicted RBP9.94□□□□□ -0.82
FN1-227ENST00000498719 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 ZNF652Q9Y2D9 606 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 DLEC1Q9Y238 1755 aa9.94□□□□□ -0.82
FN1-227ENST00000498719 A0A1B0GTH6 734 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 CCP110O43303 1012 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 ZSCAN12O43309 604 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 STX10O60499 249 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 HOXC13P31276 330 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 MCM7P33993 719 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 GTF2IP78347 998 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 SF3B3Q15393 1217 aaKnown RBP9.93□□□□□ -0.82
FN1-227ENST00000498719 IL17AQ16552 155 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 SH3RF1Q7Z6J0 888 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 SCLT1Q96NL6 688 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 GTPBP4Q9BZE4 634 aaKnown RBP9.93□□□□□ -0.82
FN1-227ENST00000498719 KBTBD4Q9NVX7 518 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 SYNRGQ9UMZ2 1314 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 COL9A1P20849 921 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 PPP2R5BQ15173 497 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 TCEA2Q15560 299 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 SNX32Q86XE0 403 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 TRIM50Q86XT4 487 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 KRT222Q8N1A0 295 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 MNS1Q8NEH6 495 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 PAWRQ96IZ0 340 aaKnown RBP9.93□□□□□ -0.82
FN1-227ENST00000498719 MTRQ99707 1265 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 CCDC113Q9H0I3 377 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 RBM28Q9NW13 759 aaKnown RBP9.93□□□□□ -0.82
FN1-227ENST00000498719 OBP2AQ9NY56 170 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 SRP68Q9UHB9 627 aaKnown RBP9.93□□□□□ -0.82
FN1-227ENST00000498719 TRPC6Q9Y210 931 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.93□□□□□ -0.82
FN1-227ENST00000498719 PTCH2Q9Y6C5 1203 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 XDHP47989 1333 aa9.93□□□□□ -0.82
FN1-227ENST00000498719 C6orf229H3BNL8 230 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 TADA3O75528 432 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 COL5A3P25940 1745 aaPredicted RBP9.92□□□□□ -0.82
FN1-227ENST00000498719 OAS2P29728 719 aaKnown RBP9.92□□□□□ -0.82
FN1-227ENST00000498719 CCT6AP40227 531 aaKnown RBP9.92□□□□□ -0.82
FN1-227ENST00000498719 NLRP5P59047 1200 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 ZC3H12AQ5D1E8 599 aaKnown RBP9.92□□□□□ -0.82
FN1-227ENST00000498719 SPATA1Q5VX52 437 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 RNF180Q86T96 592 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 FCHSD1Q86WN1 690 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 CTCFLQ8NI51 663 aaPredicted RBP9.92□□□□□ -0.82
FN1-227ENST00000498719 ATXN2LQ8WWM7 1075 aaKnown RBP9.92□□□□□ -0.82
FN1-227ENST00000498719 GPKOWQ92917 476 aaPredicted RBP eCLIP9.92□□□□□ -0.82
FN1-227ENST00000498719 SPON2Q9BUD6 331 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 LZTFL1Q9NQ48 299 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 CTNND2Q9UQB3 1225 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 MAPK8IP1Q9UQF2 711 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 CASQ1P31415 396 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 ATP2C1P98194 919 aaPredicted RBP9.92□□□□□ -0.82
FN1-227ENST00000498719 RCSD1Q6JBY9 416 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 RAD9BQ6WBX8 426 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 LHFPL2Q6ZUX7 228 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 LMNTD2Q8IXW0 634 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 OR8H2Q8N162 312 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 IGSF22Q8N9C0 903 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 PJA1Q8NG27 643 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 FERMT2Q96AC1 680 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 BRMS1Q9HCU9 246 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 FAM53CQ9NYF3 392 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 ADD3Q9UEY8 706 aaKnown RBP9.92□□□□□ -0.82
FN1-227ENST00000498719 ADAMTS1Q9UHI8 967 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 GTF2IRD1Q9UHL9 959 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 TMCC3Q9ULS5 477 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 FHOD1Q9Y613 1164 aa9.92□□□□□ -0.82
FN1-227ENST00000498719 FAM205AQ6ZU69 1335 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 TSPY2A6NKD2 308 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 AKR1B15C9JRZ8 316 aaPredicted RBP9.91□□□□□ -0.82
FN1-227ENST00000498719 OPLAHO14841 1288 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 DDAH1O94760 285 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 SEC31AO94979 1220 aaKnown RBP9.91□□□□□ -0.82
FN1-227ENST00000498719 TUBB4AP04350 444 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 SCG2P13521 617 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 DNAJB2P25686 324 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 HIBADHP31937 336 aaKnown RBP9.91□□□□□ -0.82
FN1-227ENST00000498719 RPS8P62241 208 aaKnown RBP9.91□□□□□ -0.82
FN1-227ENST00000498719 CDKAL1Q5VV42 579 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 NXNQ6DKJ4 435 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 ATCAYQ86WG3 371 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 ZNF354CQ86Y25 554 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 STAG2Q8N3U4 1231 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 RDH13Q8NBN7 331 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 KIFC2Q96AC6 838 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 GSDMAQ96QA5 445 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms