RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 MARK3P27448 753 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 ZNF76P36508 570 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 THPOP40225 353 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 EVCP57679 992 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 RAB30Q15771 203 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 SERINC5Q86VE9 423 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 RASGRP4Q8TDF6 673 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 PDRG1Q9NUG6 133 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 PTPRSQ13332 1948 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 MYO9BQ13459 2157 aa18.4■□□□□ 0.54
NR1H3-227ENST00000498548 MAFGO15525 162 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 DTNBO60941 627 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 FOSL2P15408 326 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 IFNAR1P17181 557 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 HOXC8P31273 242 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 SREBF1P36956 1147 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 ARHGAP4P98171 946 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 AP3B2Q13367 1082 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 MBTPS1Q14703 1052 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 TMCO2Q7Z6W1 182 aaPredicted RBP18.39■□□□□ 0.53
NR1H3-227ENST00000498548 OSBPL7Q9BZF2 842 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 ZMYND12Q9H0C1 365 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 GLT8D2Q9H1C3 349 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 PRDM12Q9H4Q4 367 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 AGO4Q9HCK5 861 aaKnown RBP18.39■□□□□ 0.53
NR1H3-227ENST00000498548 C6orf50Q9HD87 102 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 VPS54Q9P1Q0 977 aa18.39■□□□□ 0.53
NR1H3-227ENST00000498548 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
NR1H3-227ENST00000498548 DDX39AO00148 427 aaKnown RBP18.38■□□□□ 0.53
NR1H3-227ENST00000498548 ITGB3BPQ13352 177 aaPredicted RBP18.38■□□□□ 0.53
NR1H3-227ENST00000498548 CEP55Q53EZ4 464 aa18.38■□□□□ 0.53
NR1H3-227ENST00000498548 GLG1Q92896 1179 aa18.38■□□□□ 0.53
NR1H3-227ENST00000498548 PCYT2Q99447 389 aa18.38■□□□□ 0.53
NR1H3-227ENST00000498548 RNF26Q9BY78 433 aaPredicted RBP18.38■□□□□ 0.53
NR1H3-227ENST00000498548 SLC28A3Q9HAS3 691 aa18.38■□□□□ 0.53
NR1H3-227ENST00000498548 SLC9A2Q9UBY0 812 aa18.38■□□□□ 0.53
NR1H3-227ENST00000498548 ESYT2A0FGR8 921 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 RSPH10B2B2RC85 870 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 FAM86B1E9PN63 330 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 MEIS1O00470 390 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 CXCL10P02778 98 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 CTSHP09668 335 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 FAM86B2P0C5J1 330 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 RSPH10BP0C881 870 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 SSRP1Q08945 709 aaKnown RBP18.37■□□□□ 0.53
NR1H3-227ENST00000498548 CNKSR3Q6P9H4 555 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 PLA2G4DQ86XP0 818 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 MAFAQ8NHW3 353 aaPredicted RBP18.37■□□□□ 0.53
NR1H3-227ENST00000498548 LMBR1Q8WVP7 490 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 ZNF274Q96GC6 653 aaPredicted RBP18.37■□□□□ 0.53
NR1H3-227ENST00000498548 SDF4Q9BRK5 362 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 JPH1Q9HDC5 661 aaPredicted RBP18.37■□□□□ 0.53
NR1H3-227ENST00000498548 PCDHA11Q9Y5I1 949 aa18.37■□□□□ 0.53
NR1H3-227ENST00000498548 NFASCO94856 1347 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 GNAT1P11488 350 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 WDR5P61964 334 aaKnown RBP18.36■□□□□ 0.53
NR1H3-227ENST00000498548 IGBP1P78318 339 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 ADAM17P78536 824 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 DEFB103AP81534 67 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 RUFY4Q6ZNE9 571 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 REXO1Q8N1G1 1221 aaKnown RBP18.36■□□□□ 0.53
NR1H3-227ENST00000498548 CCDC12Q8WUD4 166 aaPredicted RBP18.36■□□□□ 0.53
NR1H3-227ENST00000498548 ZBTB10Q96DT7 871 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 SLC9A7Q96T83 725 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 SMARCAD1Q9H4L7 1026 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 CDH23Q9H251 3354 aa18.36■□□□□ 0.53
NR1H3-227ENST00000498548 LGR5O75473 907 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 BAIAP3O94812 1187 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 ARHGEF15O94989 841 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 PARNO95453 639 aaKnown RBP18.35■□□□□ 0.53
NR1H3-227ENST00000498548 GNA11P29992 359 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 KCNJ6P48051 423 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 NLRP5P59047 1200 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 ACTR2P61160 394 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 PPP2R2DQ66LE6 453 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 HERC6Q8IVU3 1022 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 TEX2Q8IWB9 1127 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 DBF4BQ8NFT6 615 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 CRYGNQ8WXF5 182 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 AIFM3Q96NN9 605 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 CERS4Q9HA82 394 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 ERAP1Q9NZ08 941 aa18.35■□□□□ 0.53
NR1H3-227ENST00000498548 NRCAMQ92823 1304 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 IGLV3-22A0A075B6J6 115 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 CPLX1O14810 134 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 CA3P07451 260 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 CYP3A4P08684 503 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 ADGRE1Q14246 886 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 GRIK4Q16099 956 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 FAM117BQ6P1L5 589 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.34■□□□□ 0.53
NR1H3-227ENST00000498548 PHOSPHO2Q8TCD6 241 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 PPM1EQ8WY54 764 aa18.34■□□□□ 0.53
NR1H3-227ENST00000498548 RFXAPO00287 272 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 EDIL3O43854 480 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 SEC24BO95487 1268 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 CCNE2O96020 404 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 IGFBP4P22692 258 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms