RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 FAM43BQ6ZT52 329 aaPredicted RBP15.74■□□□□ 0.11
SHANK2-217ENST00000498519 CTCFLQ8NI51 663 aaPredicted RBP15.74■□□□□ 0.11
SHANK2-217ENST00000498519 LMBR1Q8WVP7 490 aa15.74■□□□□ 0.11
SHANK2-217ENST00000498519 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.11
SHANK2-217ENST00000498519 RTEL1Q9NZ71 1219 aa15.74■□□□□ 0.11
SHANK2-217ENST00000498519 TET1Q8NFU7 2136 aa15.74■□□□□ 0.11
SHANK2-217ENST00000498519 COL4A6Q14031 1691 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 TCF20Q9UGU0 1960 aaKnown RBP15.73■□□□□ 0.11
SHANK2-217ENST00000498519 CYTH3O43739 400 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 BMPR1AP36894 532 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 GNAQP50148 359 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 ADAM17P78536 824 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 UTP14CQ5TAP6 766 aaKnown RBP15.73■□□□□ 0.11
SHANK2-217ENST00000498519 ADHFE1Q8IWW8 467 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 GPRASP2Q96D09 838 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 ZFP91Q96JP5 570 aaPredicted RBP15.73■□□□□ 0.11
SHANK2-217ENST00000498519 UIMC1Q96RL1 719 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 PLVAPQ9BX97 442 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 SPZ1Q9BXG8 430 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 CLDND1Q9NY35 253 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 ERAP1Q9NZ08 941 aa15.73■□□□□ 0.11
SHANK2-217ENST00000498519 PIEZO1Q92508 2521 aa15.72■□□□□ 0.11
SHANK2-217ENST00000498519 MAFGO15525 162 aa15.72■□□□□ 0.11
SHANK2-217ENST00000498519 IGHDP01880 384 aa15.72■□□□□ 0.11
SHANK2-217ENST00000498519 CYP21A2P08686 494 aa15.72■□□□□ 0.11
SHANK2-217ENST00000498519 PPFIA1Q13136 1202 aa15.72■□□□□ 0.11
SHANK2-217ENST00000498519 TMTC2Q8N394 836 aa15.72■□□□□ 0.11
SHANK2-217ENST00000498519 SEPT1Q8WYJ6 367 aa15.72■□□□□ 0.11
SHANK2-217ENST00000498519 MTA3Q9BTC8 594 aa15.72■□□□□ 0.11
SHANK2-217ENST00000498519 ADGRA3Q8IWK6 1321 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 COL4A4P53420 1690 aaPredicted RBP15.71■□□□□ 0.11
SHANK2-217ENST00000498519 DDAH1O94760 285 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 TCF7P36402 384 aaPredicted RBP15.71■□□□□ 0.11
SHANK2-217ENST00000498519 SP4Q02446 784 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 ZP2Q05996 745 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 SEMA3FQ13275 785 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 NAALADL2Q58DX5 795 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 IER5Q5VY09 327 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 TRIM50Q86XT4 487 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 GLG1Q92896 1179 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 CLP1Q92989 425 aaKnown RBP15.71■□□□□ 0.11
SHANK2-217ENST00000498519 FTHL17Q9BXU8 183 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 SMARCAD1Q9H4L7 1026 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 EHMT1Q9H9B1 1298 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 TUBE1Q9UJT0 475 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 SQORQ9Y6N5 450 aa15.71■□□□□ 0.11
SHANK2-217ENST00000498519 POTEB3A0JP26 581 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 RRN3P2A6NIE6 340 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 E7EWF7 191 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 M0QZ92 97 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 CHRNA1P02708 482 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 GHRP10912 638 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 BTG3Q14201 252 aaPredicted RBP15.7■□□□□ 0.1
SHANK2-217ENST00000498519 SMAD2Q15796 467 aaKnown RBP15.7■□□□□ 0.1
SHANK2-217ENST00000498519 SLC35G1Q2M3R5 365 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 POTEBQ6S5H4 581 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 CASC1Q6TDU7 716 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 TSHZ1Q6ZSZ6 1077 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 MFSD14AQ96MC6 490 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 PSTPIP2Q9H939 334 aa15.7■□□□□ 0.1
SHANK2-217ENST00000498519 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
SHANK2-217ENST00000498519 KIAA1217Q5T5P2 1943 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 MBLAC1A4D2B0 266 aaPredicted RBP15.69■□□□□ 0.1
SHANK2-217ENST00000498519 C19orf67A6NJJ6 358 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 SPDYE3A6NKU9 549 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 ENPP3O14638 875 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 STAG3L1P0CL83 205 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 CALM1P0DP23 149 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 CALM2P0DP24 149 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 CALM3P0DP25 149 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 MTMR1Q13613 665 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 GRIK4Q16099 956 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 CTC1Q2NKJ3 1217 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 TTC22Q5TAA0 569 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 USP17L6PQ6QN14 398 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 TEX2Q8IWB9 1127 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 PIBF1Q8WXW3 757 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 P2RX5Q93086 422 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 AZI2Q9H6S1 392 aa15.69■□□□□ 0.1
SHANK2-217ENST00000498519 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
SHANK2-217ENST00000498519 TRIP12Q14669 1992 aaPredicted RBP15.68■□□□□ 0.1
SHANK2-217ENST00000498519 MEIS2O14770 477 aa15.68■□□□□ 0.1
SHANK2-217ENST00000498519 MMP1P03956 469 aa15.68■□□□□ 0.1
SHANK2-217ENST00000498519 SMAD4Q13485 552 aaKnown RBP15.68■□□□□ 0.1
SHANK2-217ENST00000498519 LPIN1Q14693 890 aa15.68■□□□□ 0.1
SHANK2-217ENST00000498519 FBXO47Q5MNV8 452 aa15.68■□□□□ 0.1
SHANK2-217ENST00000498519 ZNF654Q8IZM8 581 aa15.68■□□□□ 0.1
SHANK2-217ENST00000498519 IGDCC4Q8TDY8 1250 aa15.68■□□□□ 0.1
SHANK2-217ENST00000498519 FSD2A1L4K1 749 aa15.67■□□□□ 0.1
SHANK2-217ENST00000498519 DGKIO75912 1065 aa15.67■□□□□ 0.1
SHANK2-217ENST00000498519 KCNA2P16389 499 aa15.67■□□□□ 0.1
SHANK2-217ENST00000498519 CHMLP26374 656 aa15.67■□□□□ 0.1
SHANK2-217ENST00000498519 MRPS6P82932 125 aaKnown RBP15.67■□□□□ 0.1
SHANK2-217ENST00000498519 MGAT3Q09327 533 aa15.67■□□□□ 0.1
SHANK2-217ENST00000498519 NFXL1Q6ZNB6 911 aa15.67■□□□□ 0.1
SHANK2-217ENST00000498519 RUFY4Q6ZNE9 571 aa15.67■□□□□ 0.1
SHANK2-217ENST00000498519 CMTR2Q8IYT2 770 aaKnown RBP15.67■□□□□ 0.1
SHANK2-217ENST00000498519 DNAJB3Q8WWF6 145 aa15.67■□□□□ 0.1
SHANK2-217ENST00000498519 ZNF689Q96CS4 500 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms