RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 PVALEFA0A1B0GWK0 134 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 BICDL2A1A5D9 508 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 TESPA1A2RU30 521 aaPredicted RBP9□□□□□ -0.97
PDZRN3-212ENST00000498048 TRIM49BA6NDI0 452 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 IPO5O00410 1097 aaKnown RBP9□□□□□ -0.97
PDZRN3-212ENST00000498048 EML1O00423 815 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 MEIS1O00470 390 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 CXCL11O14625 94 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 POTEJP0CG39 1038 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 ARP10275 920 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 MYCLP12524 364 aaPredicted RBP9□□□□□ -0.97
PDZRN3-212ENST00000498048 CDK11BP21127 795 aaKnown RBP9□□□□□ -0.97
PDZRN3-212ENST00000498048 PRCPP42785 496 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 UBASH3AP57075 661 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 SPAG1Q07617 926 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 PABPC4Q13310 644 aaKnown RBP eCLIP9□□□□□ -0.97
PDZRN3-212ENST00000498048 BAATQ14032 418 aaPredicted RBP9□□□□□ -0.97
PDZRN3-212ENST00000498048 CDKAL1Q5VV42 579 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 CCDC65Q8IXS2 484 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 ADSSL1Q8N142 457 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 KIAA0895Q8NCT3 520 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 CCDC150Q8NCX0 1101 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 CHST13Q8NET6 341 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 ANKRD20A12PQ8NF67 263 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 DDX12PQ92771 950 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 TAAR1Q96RJ0 339 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 RIT2Q99578 217 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 PAGR1Q9BTK6 254 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 POLR3CQ9BUI4 534 aaPredicted RBP9□□□□□ -0.97
PDZRN3-212ENST00000498048 UNC45AQ9H3U1 944 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 A1CFQ9NQ94 594 aaKnown RBP9□□□□□ -0.97
PDZRN3-212ENST00000498048 JADE2Q9NQC1 790 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 RRAGDQ9NQL2 400 aaPredicted RBP9□□□□□ -0.97
PDZRN3-212ENST00000498048 SAMSN1Q9NSI8 373 aaKnown RBP9□□□□□ -0.97
PDZRN3-212ENST00000498048 HOXC10Q9NYD6 342 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 MAPK8IP1Q9UQF2 711 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 UBIAD1Q9Y5Z9 338 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 CASP8AP2Q9UKL3 1982 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 UTRNP46939 3433 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 ANK1P16157 1881 aa9□□□□□ -0.97
PDZRN3-212ENST00000498048 TBCAO75347 108 aaKnown RBP8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 FCER1AP12319 257 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 ITGB5P18084 799 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 CYP11B2P19099 503 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 MUTP22033 750 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 COPB2P35606 906 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 SLC12A3P55017 1021 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 GSDMDP57764 484 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 HERVK_113P62684 666 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 MRPS9P82933 396 aaKnown RBP8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 CCDC144BQ3MJ40 725 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 COBLL1Q53SF7 1204 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 FAM26FQ5R3K3 315 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 MAP1SQ66K74 1059 aaPredicted RBP8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 XRRA1Q6P2D8 792 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 LBX2Q6XYB7 198 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 CCDC186Q7Z3E2 898 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 MIER3Q7Z3K6 550 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 FILIP1Q7Z7B0 1213 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 CATSPER3Q86XQ3 398 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 P2RX5Q93086 422 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 DHTKD1Q96HY7 919 aaPredicted RBP8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 DYDC2Q96IM9 177 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 MED15Q96RN5 788 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 LXNQ9BS40 222 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 MAF1Q9H063 256 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 ASCC2Q9H1I8 757 aaPredicted RBP8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 KCNF1Q9H3M0 494 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 AGO4Q9HCK5 861 aaKnown RBP8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 SLC39A2Q9NP94 309 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 KCNH7Q9NS40 1196 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 PANK4Q9NVE7 773 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 CYP39A1Q9NYL5 469 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 IMPACTQ9P2X3 320 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 FBXO40Q9UH90 709 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 PNMA3Q9UL41 463 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 DNM3Q9UQ16 869 aa8.99□□□□□ -0.97
PDZRN3-212ENST00000498048 RALGAPA2Q2PPJ7 1873 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 KCNJ18B7U540 433 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 TRAF5O00463 557 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 COBLO75128 1261 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 PPP1R37O75864 691 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 EYA4O95677 639 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 SPATA31C1P0DKV0 1188 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 OSBPP22059 807 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 CCNE1P24864 410 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 GJA5P36382 358 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 JAK3P52333 1124 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 ITGB3BPQ13352 177 aaPredicted RBP8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 SNAPC2Q13487 334 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 CTTNQ14247 550 aaKnown RBP8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 KCNJ12Q14500 433 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 EPHA7Q15375 998 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 FILIP1LQ4L180 1135 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 FASTKD5Q7L8L6 764 aaKnown RBP8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 OTOP1Q7RTM1 612 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 NLRX1Q86UT6 975 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 RIOX2Q8IUF8 465 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 VSTM4Q8IW00 320 aa8.98□□□□□ -0.97
PDZRN3-212ENST00000498048 FAM114A1Q8IWE2 563 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms