RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 EYSQ5T1H1 3165 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 EPOPA6NHQ4 379 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 MAFGO15525 162 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 CDC45O75419 566 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 ARHGEF15O94989 841 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 ARHGAP4P98171 946 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 MTMR1Q13613 665 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 KRT32Q14532 448 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 UBE2SQ16763 222 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 TCTN1Q2MV58 587 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 FAM117BQ6P1L5 589 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 APOA5Q6Q788 366 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 DHX32Q7L7V1 743 aaKnown RBP13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 TRIM50Q86XT4 487 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 DBF4BQ8NFT6 615 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 SEPT1Q8WYJ6 367 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 PCDHA6Q9UN73 950 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 PCDHA8Q9Y5H6 950 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 PTPRSQ13332 1948 aa13.48□□□□□ -0.25
NUDCD3-211ENST00000497978 NRCAMQ92823 1304 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 LCHNA4D1U4 455 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 TNFRSF10AO00220 468 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 ZBTB43O43298 467 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 HMGB1P09429 215 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 KCNA2P16389 499 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 ITGB5P18084 799 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 TCF7P36402 384 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 NAPAP54920 295 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 GRB10Q13322 594 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 RTN1Q16799 776 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 TSGA10IPQ3SY00 556 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 PLEKHG4Q58EX7 1191 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 TEX2Q8IWB9 1127 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 HS6ST3Q8IZP7 471 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 MYOCDQ8IZQ8 938 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 TGS1Q96RS0 853 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 JADE2Q9NQC1 790 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 ERAP1Q9NZ08 941 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 INSL6Q9Y581 213 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 UBIAD1Q9Y5Z9 338 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 KAT6AQ92794 2004 aa13.47□□□□□ -0.25
NUDCD3-211ENST00000497978 hCG_1984214I3L0E3 225 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 ATP9AO75110 1047 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 FOSP01100 380 aaPredicted RBP13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 CTSHP09668 335 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 FGD1P98174 961 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 EXOSC10Q01780 885 aaKnown RBP13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 WWC2Q6AWC2 1192 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 PPP1R18Q6NYC8 613 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 RSPH3Q86UC2 560 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 ZNF713Q8N859 430 aaPredicted RBP13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 ADAMTS19Q8TE59 1207 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 LMBR1Q8WVP7 490 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 APBB2Q92870 758 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 GLG1Q92896 1179 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 GLT8D2Q9H1C3 349 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 SMARCAD1Q9H4L7 1026 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 LMCD1Q9NZU5 365 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 COG5Q9UP83 839 aa13.46□□□□□ -0.25
NUDCD3-211ENST00000497978 PRUNE2Q8WUY3 3088 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 CNTNAP5Q8WYK1 1306 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 LINC01553A4QN01 128 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 GOLGA8AA7E2F4 631 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 GOLGA8BA8MQT2 603 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 ADCY7P51828 1080 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 ERVK-21P61565 698 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 ADAM17P78536 824 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 PPFIA1Q13136 1202 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 KRT40Q6A162 431 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 TAF2Q6P1X5 1199 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 SKAP1Q86WV1 359 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 TNPO1Q92973 898 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 TCEANC2Q96MN5 208 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 UHRF1Q96T88 793 aaPredicted RBP13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 RIC8AQ9NPQ8 531 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 NAP1L2Q9ULW6 460 aaPredicted RBP13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 TELO2Q9Y4R8 837 aa13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 V9GY48 417 aaPredicted RBP13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 PRRC2BQ5JSZ5 2229 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-211ENST00000497978 MICAL3Q7RTP6 2002 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 CHD9Q3L8U1 2897 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 KLF18A0A0U1RQI7 1052 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 SMCO2A6NFE2 343 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 MARK3P27448 753 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 RCAN1P53805 252 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 ADCK5Q3MIX3 580 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 FAM26DQ5JW98 314 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 SPRED2Q7Z698 418 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 HLA-CQ95604 372 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 YME1L1Q96TA2 773 aa13.44□□□□□ -0.26
NUDCD3-211ENST00000497978 MXRA8Q9BRK3 442 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms