RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 CCDC62Q6P9F0 684 aa17.93■□□□□ 0.46
PTK7-220ENST00000497957 MIER3Q7Z3K6 550 aa17.93■□□□□ 0.46
PTK7-220ENST00000497957 SH3RF1Q7Z6J0 888 aa17.93■□□□□ 0.46
PTK7-220ENST00000497957 CNNM3Q8NE01 707 aa17.93■□□□□ 0.46
PTK7-220ENST00000497957 RASSF8Q8NHQ8 419 aa17.93■□□□□ 0.46
PTK7-220ENST00000497957 PAGE5Q96GU1 130 aa17.93■□□□□ 0.46
PTK7-220ENST00000497957 TNMDQ9H2S6 317 aa17.93■□□□□ 0.46
PTK7-220ENST00000497957 DDX41Q9UJV9 622 aaKnown RBP17.93■□□□□ 0.46
PTK7-220ENST00000497957 GGPS1O95749 300 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 TXLNAP40222 546 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 FLT3LGP49771 235 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 DHX8Q14562 1220 aaKnown RBP17.92■□□□□ 0.46
PTK7-220ENST00000497957 EPHA7Q15375 998 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 HYIQ5T013 277 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 LENG1Q96BZ8 264 aaPredicted RBP17.92■□□□□ 0.46
PTK7-220ENST00000497957 TIGD1Q96MW7 591 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 APBA2Q99767 749 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 HSD17B14Q9BPX1 270 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 RAB34Q9BZG1 259 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 BLZF1Q9H2G9 400 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 TBC1D22BQ9NU19 505 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 ZHX1Q9UKY1 873 aaPredicted RBP17.92■□□□□ 0.46
PTK7-220ENST00000497957 KIAA1024Q9UPX6 916 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 NFASCO94856 1347 aa17.92■□□□□ 0.46
PTK7-220ENST00000497957 TMEM150BA6NC51 233 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 B4DLN1 442 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 SLITRK3O94933 977 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 SLFN14P0C7P3 912 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 ACTR2P61160 394 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 IRX5P78411 483 aaPredicted RBP17.91■□□□□ 0.46
PTK7-220ENST00000497957 TRPV1Q8NER1 839 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 SOCS4Q8WXH5 440 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 TRIB2Q92519 343 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 CALML4Q96GE6 196 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 SDF4Q9BRK5 362 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 SLC9A2Q9UBY0 812 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 CCDC39Q9UFE4 941 aa17.91■□□□□ 0.46
PTK7-220ENST00000497957 LOC102724159A0A0B4J2E5 919 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 GSTTP1A0A1W2PQM5 241 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 RBM47A0AV96 593 aaKnown RBP17.9■□□□□ 0.46
PTK7-220ENST00000497957 MAFGO15525 162 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 FARP2O94887 1054 aaPredicted RBP17.9■□□□□ 0.46
PTK7-220ENST00000497957 TXNP10599 105 aaKnown RBP17.9■□□□□ 0.46
PTK7-220ENST00000497957 RPA1P27694 616 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 PWP2Q15269 919 aaKnown RBP17.9■□□□□ 0.46
PTK7-220ENST00000497957 ISM2Q6H9L7 571 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 RBM43Q6ZSC3 357 aaKnown RBP17.9■□□□□ 0.46
PTK7-220ENST00000497957 TPH2Q8IWU9 490 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 DNAJC5GQ8N7S2 189 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 IQUBQ8NA54 791 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 ZNF296Q8WUU4 475 aaPredicted RBP17.9■□□□□ 0.46
PTK7-220ENST00000497957 RAD54LQ92698 747 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 CDHR1Q96JP9 859 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 MPHOSPH6Q99547 160 aaKnown RBP17.9■□□□□ 0.46
PTK7-220ENST00000497957 POLR3CQ9BUI4 534 aaPredicted RBP17.9■□□□□ 0.46
PTK7-220ENST00000497957 JPH1Q9HDC5 661 aaPredicted RBP17.9■□□□□ 0.46
PTK7-220ENST00000497957 VTA1Q9NP79 307 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 SYNGAP1Q96PV0 1343 aa17.9■□□□□ 0.46
PTK7-220ENST00000497957 BIN1O00499 593 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 ZNF865P0CJ78 1059 aaPredicted RBP17.89■□□□□ 0.45
PTK7-220ENST00000497957 ELNP15502 786 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 SMPD1P17405 629 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 KRT76Q01546 638 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 ARHGAP1Q07960 439 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 CUL4BQ13620 913 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 CELF3Q5SZQ8 465 aaKnown RBP17.89■□□□□ 0.45
PTK7-220ENST00000497957 OLFML2BQ68BL8 750 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 ZNF746Q6NUN9 644 aaPredicted RBP17.89■□□□□ 0.45
PTK7-220ENST00000497957 GAS2L3Q86XJ1 694 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 ERMNQ8TAM6 284 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 PIGOQ8TEQ8 1089 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 SYAP1Q96A49 352 aaPredicted RBP17.89■□□□□ 0.45
PTK7-220ENST00000497957 CDK5RAP3Q96JB5 506 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 PCYT2Q99447 389 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 SENP7Q9BQF6 1050 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 LXNQ9BS40 222 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 SLC5A4Q9NY91 659 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 SAMM50Q9Y512 469 aa17.89■□□□□ 0.45
PTK7-220ENST00000497957 NPHP3-ACAD11A0A0J9YXS1 232 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 ZNF862O60290 1169 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 FKTNO75072 461 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 SUPT20HL2P0C7V6 817 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 POSTNQ15063 836 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 CCDC144BQ3MJ40 725 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 ABHD15Q6UXT9 468 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 TRMT1LQ7Z2T5 733 aaKnown RBP17.88■□□□□ 0.45
PTK7-220ENST00000497957 CCDC60Q8IWA6 550 aaPredicted RBP17.88■□□□□ 0.45
PTK7-220ENST00000497957 CEP57L1Q8IYX8 460 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 SCFD2Q8WU76 684 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 SH2D3AQ9BRG2 576 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 FUCA2Q9BTY2 467 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 POLD4Q9HCU8 107 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 TUFT1Q9NNX1 390 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 GABBR1Q9UBS5 961 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 PCDHA5Q9Y5H7 936 aa17.88■□□□□ 0.45
PTK7-220ENST00000497957 MYMKA6NI61 221 aa17.87■□□□□ 0.45
PTK7-220ENST00000497957 WDR64B1ANS9 1081 aa17.87■□□□□ 0.45
PTK7-220ENST00000497957 STBD1O95210 358 aa17.87■□□□□ 0.45
PTK7-220ENST00000497957 SSBP05455 408 aaKnown RBP eCLIP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms