RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 SPC25Q9HBM1 224 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 PDGFCQ9NRA1 345 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 PCDHA10Q9Y5I2 948 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 KIAA1217Q5T5P2 1943 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 KDM3AQ9Y4C1 1321 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 DDX39AO00148 427 aaKnown RBP11.76□□□□□ -0.53
USP13-205ENST00000497380 SEPT4O43236 478 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 FARP2O94887 1054 aaPredicted RBP11.76□□□□□ -0.53
USP13-205ENST00000497380 PSAPP07602 524 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 CYBAP13498 195 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 CNGA1P29973 690 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 SP2Q02086 613 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 CACNB2Q08289 660 aaPredicted RBP11.76□□□□□ -0.53
USP13-205ENST00000497380 SPIRE1Q08AE8 756 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 IL17AQ16552 155 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 PRAMEF19Q5SWL8 479 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 B3GNT9Q6UX72 402 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 CABP7Q86V35 215 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 SNX29Q8TEQ0 813 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 SEPT1Q8WYJ6 367 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 POLR3CQ9BUI4 534 aaPredicted RBP11.76□□□□□ -0.53
USP13-205ENST00000497380 UNC45AQ9H3U1 944 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 TUFT1Q9NNX1 390 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 HMX1Q9NP08 348 aaPredicted RBP11.76□□□□□ -0.53
USP13-205ENST00000497380 DISC1Q9NRI5 854 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 USP25Q9UHP3 1055 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 VAV3Q9UKW4 847 aa11.76□□□□□ -0.53
USP13-205ENST00000497380 DDX49Q9Y6V7 483 aaKnown RBP11.76□□□□□ -0.53
USP13-205ENST00000497380 LRRC37A2A6NM11 1700 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 POTEMA6NI47 508 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 CHMP2AO43633 222 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 DUSP11O75319 330 aaKnown RBP11.75□□□□□ -0.53
USP13-205ENST00000497380 ATG7O95352 703 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 ARIH2O95376 493 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 P4HBP07237 508 aaKnown RBP11.75□□□□□ -0.53
USP13-205ENST00000497380 RARBP10826 455 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
USP13-205ENST00000497380 ELNP15502 786 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 RPA1P27694 616 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 CCT6AP40227 531 aaKnown RBP11.75□□□□□ -0.53
USP13-205ENST00000497380 ACTR2P61160 394 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 CAP1Q01518 475 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 FAM160B1Q5W0V3 765 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 SHC4Q6S5L8 630 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 OR6J1Q8NGC5 347 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 SYMPKQ92797 1274 aaKnown RBP11.75□□□□□ -0.53
USP13-205ENST00000497380 ATP6V0A1Q93050 837 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 GJA10Q969M2 543 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 SPATA33Q96N06 139 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 UIMC1Q96RL1 719 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 EIF2AK1Q9BQI3 630 aaKnown RBP11.75□□□□□ -0.53
USP13-205ENST00000497380 CUEDC2Q9H467 287 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 AZI2Q9H6S1 392 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 KCNH3Q9ULD8 1083 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 PTCH2Q9Y6C5 1203 aa11.75□□□□□ -0.53
USP13-205ENST00000497380 ZSWIM8A7E2V4 1837 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 MCM3APO60318 1980 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 FAM237AA0A1B0GTK4 181 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 BACH1O14867 736 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 ZEB2O60315 1214 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 PPFIA4O75335 1185 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 SMPD1P17405 629 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 SYKP43405 635 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 QARSP47897 775 aaKnown RBP11.74□□□□□ -0.53
USP13-205ENST00000497380 CPT1AP50416 773 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 SLC26A2P50443 739 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 SOX10P56693 466 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 SP4Q02446 784 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 GRIN1Q05586 938 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 NFKBIBQ15653 356 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 SLC9C1Q4G0N8 1177 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 SPECC1Q5M775 1068 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 HYIQ5T013 277 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 MAP3K21Q5TCX8 1036 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 RRAGBQ5VZM2 374 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 KANK3Q6NY19 840 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 FBXO46Q6PJ61 603 aaPredicted RBP11.74□□□□□ -0.53
USP13-205ENST00000497380 ABHD15Q6UXT9 468 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 IQUBQ8NA54 791 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 PPTC7Q8NI37 304 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 EPSTI1Q96J88 318 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 ZSWIM4Q9H7M6 989 aa11.74□□□□□ -0.53
USP13-205ENST00000497380 HOOK1Q9UJC3 728 aaKnown RBP11.74□□□□□ -0.53
USP13-205ENST00000497380 GNEQ9Y223 722 aaKnown RBP11.74□□□□□ -0.53
USP13-205ENST00000497380 A0A1B0GVL5 298 aa11.73□□□□□ -0.53
USP13-205ENST00000497380 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.73□□□□□ -0.53
USP13-205ENST00000497380 EML1O00423 815 aa11.73□□□□□ -0.53
USP13-205ENST00000497380 DYNC1LI2O43237 492 aaPredicted RBP11.73□□□□□ -0.53
USP13-205ENST00000497380 KPNA6O60684 536 aa11.73□□□□□ -0.53
USP13-205ENST00000497380 KINO60870 393 aaKnown RBP11.73□□□□□ -0.53
USP13-205ENST00000497380 GADD45BO75293 160 aaPredicted RBP11.73□□□□□ -0.53
USP13-205ENST00000497380 INHAP05111 366 aa11.73□□□□□ -0.53
USP13-205ENST00000497380 SUPT20HL2P0C7V6 817 aa11.73□□□□□ -0.53
USP13-205ENST00000497380 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.53
USP13-205ENST00000497380 PFKFB1P16118 471 aa11.73□□□□□ -0.53
USP13-205ENST00000497380 TCF7P36402 384 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms