RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PCDHA13Q9Y5I0 950 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 GMEB1Q9Y692 573 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 CAPN6Q9Y6Q1 641 aa9.92□□□□□ -0.82
HPS4-217ENST00000496385 NRXN2Q9P2S2 1712 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 ZFYP08048 801 aaPredicted RBP9.91□□□□□ -0.82
HPS4-217ENST00000496385 ACADSP16219 412 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 MSH2P43246 934 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 GUCY2FP51841 1108 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 ANTXR2P58335 489 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 NCALDP61601 193 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 RAB3IPQ96QF0 476 aaPredicted RBP9.91□□□□□ -0.82
HPS4-217ENST00000496385 HINFPQ9BQA5 517 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 BRIP1Q9BX63 1249 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 FAM192AQ9GZU8 254 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 CSRNP2Q9H175 543 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 ZWILCHQ9H900 591 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 GPHNQ9NQX3 736 aaPredicted RBP9.91□□□□□ -0.82
HPS4-217ENST00000496385 LRWD1Q9UFC0 647 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 CNOT8Q9UFF9 292 aaKnown RBP9.91□□□□□ -0.82
HPS4-217ENST00000496385 NOVA2Q9UNW9 492 aaKnown RBP9.91□□□□□ -0.82
HPS4-217ENST00000496385 PHF24Q9UPV7 400 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 DUSP10Q9Y6W6 482 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 ECM29Q5VYK3 1845 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 PCCAP05165 728 aaPredicted RBP9.91□□□□□ -0.82
HPS4-217ENST00000496385 KCNA3P22001 575 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 GNAQP50148 359 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 NLRP5P59047 1200 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 GRIN1Q05586 938 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 NTRK3Q16288 839 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 DBN1Q16643 649 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 ERICH1Q86X53 443 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 FBF1Q8TES7 1133 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 NELFBQ8WX92 580 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 TMEM87BQ96K49 555 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 PBKQ96KB5 322 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 NOX5Q96PH1 765 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 TLR10Q9BXR5 811 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 TMCO1Q9UM00 188 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 BCS1LQ9Y276 419 aa9.91□□□□□ -0.82
HPS4-217ENST00000496385 COL11A2P13942 1736 aaPredicted RBP9.9□□□□□ -0.82
HPS4-217ENST00000496385 H0YIN7 160 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 O00370 1275 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 GTPBP6O43824 516 aaPredicted RBP9.9□□□□□ -0.82
HPS4-217ENST00000496385 CTNND1O60716 968 aaKnown RBP9.9□□□□□ -0.82
HPS4-217ENST00000496385 FMNL1O95466 1100 aaPredicted RBP9.9□□□□□ -0.82
HPS4-217ENST00000496385 RARAP10276 462 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 GNAZP19086 355 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 TRIM21P19474 475 aaKnown RBP9.9□□□□□ -0.82
HPS4-217ENST00000496385 COPS2P61201 443 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 SSRP1Q08945 709 aaKnown RBP9.9□□□□□ -0.82
HPS4-217ENST00000496385 BNIP1Q12981 228 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 ACBD5Q5T8D3 534 aaPredicted RBP9.9□□□□□ -0.82
HPS4-217ENST00000496385 IRGCQ6NXR0 463 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 HOOK3Q86VS8 718 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 MAIP1Q8WWC4 291 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 KLHL29Q96CT2 875 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 AIFM3Q96NN9 605 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 NLRP3Q96P20 1036 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 POLD4Q9HCU8 107 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 EXOC1Q9NV70 894 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 CTTNBP2NLQ9P2B4 639 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 MAGEC2Q9UBF1 373 aaPredicted RBP9.9□□□□□ -0.82
HPS4-217ENST00000496385 TFR2Q9UP52 801 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 PLAGL2Q9UPG8 496 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 CD2APQ9Y5K6 639 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 CACNA1SQ13698 1873 aa9.9□□□□□ -0.82
HPS4-217ENST00000496385 NID2Q14112 1375 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 PDE6BP35913 854 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 AFMP43652 599 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 CTDSPL2Q05D32 466 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 TFCP2Q12800 502 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 TSNAXIP1Q2TAA8 658 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 ARHGAP27Q6ZUM4 889 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 LCA5Q86VQ0 697 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 DBNDD2Q9BQY9 259 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 VCX3BQ9H321 246 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 VCX3AQ9NNX9 186 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 ADAM22Q9P0K1 906 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 ATXN10Q9UBB4 475 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 RPL26L1Q9UNX3 145 aaKnown RBP9.9□□□□□ -0.83
HPS4-217ENST00000496385 SLC4A7Q9Y6M7 1214 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 MYH7P12883 1935 aa9.9□□□□□ -0.83
HPS4-217ENST00000496385 COL4A1P02462 1669 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 RGL2O15211 777 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 MOCS3O95396 460 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 TPP2P29144 1249 aaPredicted RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 RFX5P48382 616 aaPredicted RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 CASP7P55210 303 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 MAGOHP61326 146 aaKnown RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 ADAM9Q13443 819 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 UAP1Q16222 522 aaPredicted RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 KLHDC7AQ5VTJ3 777 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 APOA5Q6Q788 366 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 ASRGL1Q7L266 308 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 DIS3L2Q8IYB7 885 aaKnown RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 RPGRQ92834 1020 aaKnown RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 KIFAP3Q92845 792 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 MAGOHBQ96A72 148 aaKnown RBP9.89□□□□□ -0.83
HPS4-217ENST00000496385 FAM167BQ9BTA0 163 aa9.89□□□□□ -0.83
HPS4-217ENST00000496385 CCDC28BQ9BUN5 200 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms