RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 CHMP4BP1P59074 171 aa22.73■■□□□ 1.23
COL9A2-210ENST00000495948 MDM2Q00987 491 aaPredicted RBP22.73■■□□□ 1.23
COL9A2-210ENST00000495948 NR5A1Q13285 461 aa22.73■■□□□ 1.23
COL9A2-210ENST00000495948 PIK3AP1Q6ZUJ8 805 aa22.73■■□□□ 1.23
COL9A2-210ENST00000495948 NEK8Q86SG6 692 aa22.73■■□□□ 1.23
COL9A2-210ENST00000495948 C7orf31Q8N865 590 aa22.73■■□□□ 1.23
COL9A2-210ENST00000495948 FAM184AQ8NB25 1140 aa22.73■■□□□ 1.23
COL9A2-210ENST00000495948 PCDH10Q9P2E7 1040 aa22.73■■□□□ 1.23
COL9A2-210ENST00000495948 COLQQ9Y215 455 aaPredicted RBP22.73■■□□□ 1.23
COL9A2-210ENST00000495948 DHX15O43143 795 aaKnown RBP22.72■■□□□ 1.23
COL9A2-210ENST00000495948 LGR5O75473 907 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 TIMP1P01033 207 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 HOXC8P31273 242 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 FOSBP53539 338 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 ACTR2P61160 394 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 PPP1R13LQ8WUF5 828 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 NAP1L4Q99733 375 aaKnown RBP22.72■■□□□ 1.23
COL9A2-210ENST00000495948 NOC4LQ9BVI4 516 aaKnown RBP22.72■■□□□ 1.23
COL9A2-210ENST00000495948 HIPK3Q9H422 1215 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 HDAC6Q9UBN7 1215 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 TCEAL9Q9UHQ7 104 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 KIF3AQ9Y496 699 aa22.72■■□□□ 1.23
COL9A2-210ENST00000495948 MSH4O15457 936 aa22.71■■□□□ 1.23
COL9A2-210ENST00000495948 SAFBQ15424 915 aaKnown RBP eCLIP22.71■■□□□ 1.23
COL9A2-210ENST00000495948 UTP14CQ5TAP6 766 aaKnown RBP22.71■■□□□ 1.23
COL9A2-210ENST00000495948 PPP4R3AQ6IN85 833 aa22.71■■□□□ 1.23
COL9A2-210ENST00000495948 GDF6Q6KF10 455 aaPredicted RBP22.71■■□□□ 1.23
COL9A2-210ENST00000495948 ZNF746Q6NUN9 644 aaPredicted RBP22.71■■□□□ 1.23
COL9A2-210ENST00000495948 BADQ92934 168 aa22.71■■□□□ 1.23
COL9A2-210ENST00000495948 NOD1Q9Y239 953 aa22.71■■□□□ 1.23
COL9A2-210ENST00000495948 BTBD18B2RXH4 712 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 DDX39AO00148 427 aaKnown RBP22.7■■□□□ 1.22
COL9A2-210ENST00000495948 ATG7O95352 703 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 CCNE2O96020 404 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 KRT76Q01546 638 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 PTGISQ16647 500 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 LETM2Q2VYF4 491 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 EARS2Q5JPH6 523 aaKnown RBP22.7■■□□□ 1.22
COL9A2-210ENST00000495948 FBXO18Q8NFZ0 1043 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 SLC5A5Q92911 643 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 CTAGE1Q96RT6 745 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 RIT2Q99578 217 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 PPP1R12CQ9BZL4 782 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 SMARCAD1Q9H4L7 1026 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 ERAP1Q9NZ08 941 aa22.7■■□□□ 1.22
COL9A2-210ENST00000495948 DDX25Q9UHL0 483 aaKnown RBP22.7■■□□□ 1.22
COL9A2-210ENST00000495948 PITPNM1O00562 1244 aa22.69■■□□□ 1.22
COL9A2-210ENST00000495948 SMIM10L2AP0DMW4 78 aa22.69■■□□□ 1.22
COL9A2-210ENST00000495948 SMIM10L2BP0DMW5 78 aa22.69■■□□□ 1.22
COL9A2-210ENST00000495948 FPGSQ05932 587 aa22.69■■□□□ 1.22
COL9A2-210ENST00000495948 RBL2Q08999 1139 aa22.69■■□□□ 1.22
COL9A2-210ENST00000495948 MFSD5Q6N075 450 aa22.69■■□□□ 1.22
COL9A2-210ENST00000495948 SMAP1Q8IYB5 467 aaPredicted RBP22.69■■□□□ 1.22
COL9A2-210ENST00000495948 ETNPPLQ8TBG4 499 aa22.69■■□□□ 1.22
COL9A2-210ENST00000495948 PCYT2Q99447 389 aa22.69■■□□□ 1.22
COL9A2-210ENST00000495948 UBE2OQ9C0C9 1292 aaKnown RBP22.69■■□□□ 1.22
COL9A2-210ENST00000495948 AZI2Q9H6S1 392 aa22.69■■□□□ 1.22
COL9A2-210ENST00000495948 RANBP2P49792 3224 aaKnown RBP22.68■■□□□ 1.22
COL9A2-210ENST00000495948 IGKV6D-21A0A0A0MT36 114 aa22.68■■□□□ 1.22
COL9A2-210ENST00000495948 FAM205CA6NFA0 338 aa22.68■■□□□ 1.22
COL9A2-210ENST00000495948 SLC37A4O43826 429 aa22.68■■□□□ 1.22
COL9A2-210ENST00000495948 CYP2C9P11712 490 aa22.68■■□□□ 1.22
COL9A2-210ENST00000495948 GUCY1B3Q02153 619 aa22.68■■□□□ 1.22
COL9A2-210ENST00000495948 ABHD15Q6UXT9 468 aa22.68■■□□□ 1.22
COL9A2-210ENST00000495948 CCDC155Q8N6L0 562 aa22.68■■□□□ 1.22
COL9A2-210ENST00000495948 CAGE1Q8TC20 777 aa22.68■■□□□ 1.22
COL9A2-210ENST00000495948 GLG1Q92896 1179 aa22.68■■□□□ 1.22
COL9A2-210ENST00000495948 UMODL1Q5DID0 1318 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 C17orf102A2RUQ5 167 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 GAS7O60861 476 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 SLC26A2P50443 739 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 LRCH2Q5VUJ6 765 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 PLPPR4Q7Z2D5 763 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 TMEM199Q8N511 208 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 AFAP1L1Q8TED9 768 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 TEKT3Q9BXF9 490 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 FOXP1Q9H334 677 aaPredicted RBP22.67■■□□□ 1.22
COL9A2-210ENST00000495948 KCNMB3Q9NPA1 279 aa22.67■■□□□ 1.22
COL9A2-210ENST00000495948 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.67■■□□□ 1.22
COL9A2-210ENST00000495948 NRCAMQ92823 1304 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 WDR64B1ANS9 1081 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 CCNT1O60563 726 aaKnown RBP22.66■■□□□ 1.22
COL9A2-210ENST00000495948 PSMD10O75832 226 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 GNAT1P11488 350 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 CYP2C18P33260 490 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 PTK7Q13308 1070 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 PPIGQ13427 754 aaKnown RBP eCLIP22.66■■□□□ 1.22
COL9A2-210ENST00000495948 CUL4AQ13619 759 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 FAM160B1Q5W0V3 765 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 MIS18BP1Q6P0N0 1132 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 CCDC60Q8IWA6 550 aaPredicted RBP22.66■■□□□ 1.22
COL9A2-210ENST00000495948 TDHQ8IZJ6 230 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 WNT8AQ9H1J5 351 aa22.66■■□□□ 1.22
COL9A2-210ENST00000495948 IGSF9BQ9UPX0 1349 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 TBX3O15119 743 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 MARK3P27448 753 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 GJB2P29033 226 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 STAT5BP51692 787 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 JAK3P52333 1124 aa22.65■■□□□ 1.22
COL9A2-210ENST00000495948 BFSP2Q13515 415 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms