RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 ITGB1P05556 798 aa11.99□□□□□ -0.49
C9orf78-207ENST00000495934 NMIQ13287 307 aaPredicted RBP11.99□□□□□ -0.49
C9orf78-207ENST00000495934 BTG3Q14201 252 aaPredicted RBP11.99□□□□□ -0.49
C9orf78-207ENST00000495934 KREMEN2Q8NCW0 462 aa11.99□□□□□ -0.49
C9orf78-207ENST00000495934 P2RX5Q93086 422 aa11.99□□□□□ -0.49
C9orf78-207ENST00000495934 IL25Q9H293 177 aa11.99□□□□□ -0.49
C9orf78-207ENST00000495934 DDX41Q9UJV9 622 aaKnown RBP11.99□□□□□ -0.49
C9orf78-207ENST00000495934 PNMA2Q9UL42 364 aa11.99□□□□□ -0.49
C9orf78-207ENST00000495934 OTOGLQ3ZCN5 2332 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 PLXNA4Q9HCM2 1894 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 FRMPD2Q68DX3 1309 aaPredicted RBP11.98□□□□□ -0.49
C9orf78-207ENST00000495934 C17orf102A2RUQ5 167 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 TSPY2A6NKD2 308 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 CAND2O75155 1236 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 SLC3A2P08195 630 aaKnown RBP11.98□□□□□ -0.49
C9orf78-207ENST00000495934 HOXD8P13378 290 aaPredicted RBP11.98□□□□□ -0.49
C9orf78-207ENST00000495934 GNAT2P19087 354 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 SP100P23497 879 aaPredicted RBP11.98□□□□□ -0.49
C9orf78-207ENST00000495934 MTMR3Q13615 1198 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 LAMC2Q13753 1193 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 VPS53Q5VIR6 699 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 ASTLQ6HA08 431 aaPredicted RBP11.98□□□□□ -0.49
C9orf78-207ENST00000495934 ZNF589Q86UQ0 364 aaPredicted RBP11.98□□□□□ -0.49
C9orf78-207ENST00000495934 SPPL3Q8TCT6 385 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 IL17RBQ9NRM6 502 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 PCDHGC5Q9Y5F6 944 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 ZFHX4Q86UP3 3567 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 KAT6AQ92794 2004 aa11.98□□□□□ -0.49
C9orf78-207ENST00000495934 WDR19Q8NEZ3 1342 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 TREHO43280 583 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 CHMLP26374 656 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 HOXC8P31273 242 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 RBM10P98175 930 aaKnown RBP11.97□□□□□ -0.49
C9orf78-207ENST00000495934 PPARAQ07869 468 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 PUM1Q14671 1186 aaKnown RBP eCLIP11.97□□□□□ -0.49
C9orf78-207ENST00000495934 STXBP2Q15833 593 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 NAALADL2Q58DX5 795 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 BMP2KLQ5H9B9 411 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 UBALD2Q8IYN6 164 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 IFNL3Q8IZI9 196 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 KLHL23Q8NBE8 558 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 NSUN6Q8TEA1 469 aaKnown RBP11.97□□□□□ -0.49
C9orf78-207ENST00000495934 ZNF689Q96CS4 500 aaPredicted RBP11.97□□□□□ -0.49
C9orf78-207ENST00000495934 TLE6Q9H808 572 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 GPCPD1Q9NPB8 672 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 HELLSQ9NRZ9 838 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 MRVI1Q9Y6F6 885 aa11.97□□□□□ -0.49
C9orf78-207ENST00000495934 ATRXP46100 2492 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 SORBS3O60504 671 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 BRD1O95696 1058 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 SMIM10L2AP0DMW4 78 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 SMIM10L2BP0DMW5 78 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 USH1GQ495M9 461 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 KIAA2013Q8IYS2 634 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 RGS22Q8NE09 1264 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 VN1R2Q8NFZ6 395 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 KCNG4Q8TDN1 519 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 POF1BQ8WVV4 589 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 NEK1Q96PY6 1258 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 TAAR1Q96RJ0 339 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 MFSD1Q9H3U5 465 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 SORCS3Q9UPU3 1222 aa11.96□□□□□ -0.49
C9orf78-207ENST00000495934 MRPL42Q9Y6G3 142 aaKnown RBP11.96□□□□□ -0.49
C9orf78-207ENST00000495934 PATL2C9JE40 543 aaKnown RBP11.95□□□□□ -0.5
C9orf78-207ENST00000495934 PER2O15055 1255 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 PPFIA4O75335 1185 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 MCMDC2Q4G0Z9 681 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 CWC27Q6UX04 472 aaKnown RBP11.95□□□□□ -0.5
C9orf78-207ENST00000495934 SYTL5Q8TDW5 730 aaPredicted RBP11.95□□□□□ -0.5
C9orf78-207ENST00000495934 ATP8B4Q8TF62 1192 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 SPATA33Q96N06 139 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 IWS1Q96ST2 819 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 C16orf70Q9BSU1 422 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 NACAP1Q9BZK3 213 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 NAPBQ9H115 298 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 COL20A1Q9P218 1284 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
C9orf78-207ENST00000495934 MYH6P13533 1939 aa11.95□□□□□ -0.5
C9orf78-207ENST00000495934 DGKIO75912 1065 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 GHRP10912 638 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
C9orf78-207ENST00000495934 NOVP48745 357 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 CLCN5P51795 746 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 HSDL1Q3SXM5 330 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 MYSM1Q5VVJ2 828 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 CMTR2Q8IYT2 770 aaKnown RBP11.94□□□□□ -0.5
C9orf78-207ENST00000495934 MICAL1Q8TDZ2 1067 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 TBC1D5Q92609 795 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 RMDN3Q96TC7 470 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 APOL5Q9BWW9 433 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 SMOC2Q9H3U7 446 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 RNPEPQ9H4A4 650 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 NR2E1Q9Y466 385 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 USP24Q9UPU5 2620 aa11.94□□□□□ -0.5
C9orf78-207ENST00000495934 FSD2A1L4K1 749 aa11.93□□□□□ -0.5
C9orf78-207ENST00000495934 H3BRB1 525 aa11.93□□□□□ -0.5
C9orf78-207ENST00000495934 ENPP3O14638 875 aa11.93□□□□□ -0.5
C9orf78-207ENST00000495934 RANBP6O60518 1105 aaKnown RBP11.93□□□□□ -0.5
C9orf78-207ENST00000495934 EIF3JO75822 258 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms