RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 FAM47CQ5HY64 1035 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 MFSD5Q6N075 450 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 C7orf31Q8N865 590 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 NECAB1Q8N987 351 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 DAGLBQ8NCG7 672 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 TMC2Q8TDI7 906 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 ZSCAN31Q96LW9 406 aaPredicted RBP14.09□□□□□ -0.15
MRPL55-233ENST00000495899 C16orf70Q9BSU1 422 aa14.09□□□□□ -0.15
MRPL55-233ENST00000495899 ORC3Q9UBD5 711 aaPredicted RBP14.09□□□□□ -0.15
MRPL55-233ENST00000495899 KIAA1217Q5T5P2 1943 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 H3BRB1 525 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 ADAMTS3O15072 1205 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 SORBS3O60504 671 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 CIITAP33076 1130 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 PSEN2P49810 448 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 RABEP1Q15276 862 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 KIAA0753Q2KHM9 967 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 TDHQ8IZJ6 230 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 BLIDQ8IZY5 108 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 TMEM199Q8N511 208 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 CYP2W1Q8TAV3 490 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 KCNV2Q8TDN2 545 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 SEPT1Q8WYJ6 367 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 PHF20Q9BVI0 1012 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 TUT1Q9H6E5 874 aaKnown RBP14.08□□□□□ -0.16
MRPL55-233ENST00000495899 AGO4Q9HCK5 861 aaKnown RBP14.08□□□□□ -0.16
MRPL55-233ENST00000495899 NFASCO94856 1347 aa14.08□□□□□ -0.16
MRPL55-233ENST00000495899 RANBP2P49792 3224 aaKnown RBP14.07□□□□□ -0.16
MRPL55-233ENST00000495899 IGLV3-22A0A075B6J6 115 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 FAM86B1E9PN63 330 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 M0R2N6 131 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 LARGE1O95461 756 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 LGALS2P05162 132 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 FAM86B2P0C5J1 330 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 ZNF286BP0CG31 522 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 ARP10275 920 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 SETQ01105 290 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-233ENST00000495899 FPGSQ05932 587 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 NSUN7Q8NE18 718 aaKnown RBP14.07□□□□□ -0.16
MRPL55-233ENST00000495899 AIFM3Q96NN9 605 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 SDF4Q9BRK5 362 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 LLPHQ9BRT6 129 aaKnown RBP14.07□□□□□ -0.16
MRPL55-233ENST00000495899 NOC4LQ9BVI4 516 aaKnown RBP14.07□□□□□ -0.16
MRPL55-233ENST00000495899 HIPK3Q9H422 1215 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 JPH1Q9HDC5 661 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-233ENST00000495899 SH2B1Q9NRF2 756 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-233ENST00000495899 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
MRPL55-233ENST00000495899 GTF2IRD1Q9UHL9 959 aa14.07□□□□□ -0.16
MRPL55-233ENST00000495899 FDPSP14324 419 aaKnown RBP14.06□□□□□ -0.16
MRPL55-233ENST00000495899 CHMP4BP1P59074 171 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 NPY5RQ15761 445 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 PTGISQ16647 500 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 KRT25Q7Z3Z0 450 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 PLA2G4DQ86XP0 818 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 ALG1Q9BT22 464 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 HDAC6Q9UBN7 1215 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 SLC9A2Q9UBY0 812 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 ZNF215Q9UL58 517 aaPredicted RBP14.06□□□□□ -0.16
MRPL55-233ENST00000495899 NOD1Q9Y239 953 aa14.06□□□□□ -0.16
MRPL55-233ENST00000495899 GSTTP1A0A1W2PQM5 241 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 IPO5O00410 1097 aaKnown RBP14.05□□□□□ -0.16
MRPL55-233ENST00000495899 ST18O60284 1047 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 TCF7P36402 384 aaPredicted RBP14.05□□□□□ -0.16
MRPL55-233ENST00000495899 PPIGQ13427 754 aaKnown RBP eCLIP14.05□□□□□ -0.161e-6■■■■□ 24.6
MRPL55-233ENST00000495899 BFSP2Q13515 415 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 NONOQ15233 471 aaKnown RBP eCLIP14.05□□□□□ -0.16
MRPL55-233ENST00000495899 LRIT3Q3SXY7 679 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 GDF6Q6KF10 455 aaPredicted RBP14.05□□□□□ -0.16
MRPL55-233ENST00000495899 CCDC155Q8N6L0 562 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 TBCKQ8TEA7 893 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 TBC1D32Q96NH3 1257 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 SMARCAD1Q9H4L7 1026 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 TBC1D22BQ9NU19 505 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 PKD2L1Q9P0L9 805 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 KCNJ14Q9UNX9 436 aa14.05□□□□□ -0.16
MRPL55-233ENST00000495899 SCN10AQ9Y5Y9 1956 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 CYP3A7-CYP3A51PA0A087WV96 503 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 DHX15O43143 795 aaKnown RBP14.04□□□□□ -0.16
MRPL55-233ENST00000495899 ATG7O95352 703 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 GNAT1P11488 350 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 CYP2C9P11712 490 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 CYP3A7P24462 503 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 HOXC8P31273 242 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 CYP2C18P33260 490 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 SP4Q02446 784 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 ITGB3BPQ13352 177 aaPredicted RBP14.04□□□□□ -0.16
MRPL55-233ENST00000495899 PRR16Q569H4 304 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 MOXD1Q6UVY6 613 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 RETREG2Q8NC44 543 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 CAGE1Q8TC20 777 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 ZNF577Q9BSK1 485 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 PPP1R12CQ9BZL4 782 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 ERAP1Q9NZ08 941 aa14.04□□□□□ -0.16
MRPL55-233ENST00000495899 EDIL3O43854 480 aa14.03□□□□□ -0.16
MRPL55-233ENST00000495899 LGR5O75473 907 aa14.03□□□□□ -0.16
MRPL55-233ENST00000495899 SMIM10L2AP0DMW4 78 aa14.03□□□□□ -0.16
MRPL55-233ENST00000495899 SMIM10L2BP0DMW5 78 aa14.03□□□□□ -0.16
MRPL55-233ENST00000495899 CSF2RAP15509 400 aa14.03□□□□□ -0.16
MRPL55-233ENST00000495899 FXR1P51114 621 aaKnown RBP eCLIP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms