RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 NFASCO94856 1347 aa27.67■■■□□ 2.02
HLA-C-209ENST00000495835 NRCAMQ92823 1304 aa27.67■■■□□ 2.02
HLA-C-209ENST00000495835 GNA11P29992 359 aa27.67■■■□□ 2.02
HLA-C-209ENST00000495835 ZNF618Q5T7W0 954 aa27.67■■■□□ 2.02
HLA-C-209ENST00000495835 UTP14CQ5TAP6 766 aaKnown RBP27.67■■■□□ 2.02
HLA-C-209ENST00000495835 TRAF7Q6Q0C0 670 aa27.67■■■□□ 2.02
HLA-C-209ENST00000495835 EYSQ5T1H1 3165 aa27.67■■■□□ 2.02
HLA-C-209ENST00000495835 GSTTP1A0A1W2PQM5 241 aa27.66■■■□□ 2.02
HLA-C-209ENST00000495835 MEIS1O00470 390 aa27.66■■■□□ 2.02
HLA-C-209ENST00000495835 ADAM17P78536 824 aa27.66■■■□□ 2.02
HLA-C-209ENST00000495835 PKN1Q16512 942 aa27.66■■■□□ 2.02
HLA-C-209ENST00000495835 ZNF274Q96GC6 653 aaPredicted RBP27.66■■■□□ 2.02
HLA-C-209ENST00000495835 SMARCAD1Q9H4L7 1026 aa27.66■■■□□ 2.02
HLA-C-209ENST00000495835 ERAP1Q9NZ08 941 aa27.66■■■□□ 2.02
HLA-C-209ENST00000495835 ABHD14A-ACY1A0A1B0GW23 586 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 KIF28PB7ZC32 967 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 TREHO43280 583 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 NBNO60934 754 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 KCNJ6P48051 423 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 SP4Q02446 784 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 MAFAQ8NHW3 353 aaPredicted RBP27.65■■■□□ 2.02
HLA-C-209ENST00000495835 BICD2Q8TD16 824 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 TNPO1Q92973 898 aaKnown RBP27.65■■■□□ 2.02
HLA-C-209ENST00000495835 WNT8BQ93098 351 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 SDF4Q9BRK5 362 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 NKX2-4Q9H2Z4 354 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 JPH1Q9HDC5 661 aaPredicted RBP27.65■■■□□ 2.02
HLA-C-209ENST00000495835 SLC9A2Q9UBY0 812 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 YBX2Q9Y2T7 364 aaKnown RBP27.65■■■□□ 2.02
HLA-C-209ENST00000495835 UNC80Q8N2C7 3258 aa27.65■■■□□ 2.02
HLA-C-209ENST00000495835 RSPH10B2B2RC85 870 aa27.64■■■□□ 2.02
HLA-C-209ENST00000495835 EIF5BO60841 1220 aaKnown RBP27.64■■■□□ 2.02
HLA-C-209ENST00000495835 CYP3A4P08684 503 aa27.64■■■□□ 2.02
HLA-C-209ENST00000495835 RSPH10BP0C881 870 aa27.64■■■□□ 2.02
HLA-C-209ENST00000495835 TOB2Q14106 344 aaPredicted RBP27.64■■■□□ 2.02
HLA-C-209ENST00000495835 TRIM50Q86XT4 487 aa27.64■■■□□ 2.02
HLA-C-209ENST00000495835 CCDC148Q8NFR7 591 aa27.64■■■□□ 2.02
HLA-C-209ENST00000495835 GAS2L1Q99501 681 aaPredicted RBP27.64■■■□□ 2.02
HLA-C-209ENST00000495835 SETD4Q9NVD3 440 aa27.64■■■□□ 2.02
HLA-C-209ENST00000495835 TELO2Q9Y4R8 837 aa27.64■■■□□ 2.02
HLA-C-209ENST00000495835 CENPBP07199 599 aaPredicted RBP27.63■■■□□ 2.01
HLA-C-209ENST00000495835 THPOP40225 353 aa27.63■■■□□ 2.01
HLA-C-209ENST00000495835 ARHGAP4P98171 946 aa27.63■■■□□ 2.01
HLA-C-209ENST00000495835 IKBKEQ14164 716 aa27.63■■■□□ 2.01
HLA-C-209ENST00000495835 RPAINQ86UA6 219 aa27.63■■■□□ 2.01
HLA-C-209ENST00000495835 CRYGNQ8WXF5 182 aa27.63■■■□□ 2.01
HLA-C-209ENST00000495835 SH3GLB2Q9NR46 395 aa27.63■■■□□ 2.01
HLA-C-209ENST00000495835 TMEM260Q9NX78 707 aa27.63■■■□□ 2.01
HLA-C-209ENST00000495835 CHD7Q9P2D1 2997 aa27.62■■■□□ 2.01
HLA-C-209ENST00000495835 LGR5O75473 907 aa27.62■■■□□ 2.01
HLA-C-209ENST00000495835 ZNF76P36508 570 aa27.62■■■□□ 2.01
HLA-C-209ENST00000495835 RABGGTBP53611 331 aa27.62■■■□□ 2.01
HLA-C-209ENST00000495835 HERC6Q8IVU3 1022 aa27.62■■■□□ 2.01
HLA-C-209ENST00000495835 REXO1Q8N1G1 1221 aaKnown RBP27.62■■■□□ 2.01
HLA-C-209ENST00000495835 CYP2W1Q8TAV3 490 aa27.62■■■□□ 2.01
HLA-C-209ENST00000495835 GLG1Q92896 1179 aa27.62■■■□□ 2.01
HLA-C-209ENST00000495835 PHKBQ93100 1093 aa27.62■■■□□ 2.01
HLA-C-209ENST00000495835 PGBD1Q96JS3 809 aa27.62■■■□□ 2.01
HLA-C-209ENST00000495835 MYO9BQ13459 2157 aa27.61■■■□□ 2.01
HLA-C-209ENST00000495835 RPLP2P05387 115 aaKnown RBP27.61■■■□□ 2.01
HLA-C-209ENST00000495835 WDR5P61964 334 aaKnown RBP27.61■■■□□ 2.01
HLA-C-209ENST00000495835 MBTPS1Q14703 1052 aa27.61■■■□□ 2.01
HLA-C-209ENST00000495835 JAKMIP3Q5VZ66 844 aa27.61■■■□□ 2.01
HLA-C-209ENST00000495835 PPP2R2DQ66LE6 453 aa27.61■■■□□ 2.01
HLA-C-209ENST00000495835 TAF2Q6P1X5 1199 aa27.61■■■□□ 2.01
HLA-C-209ENST00000495835 FAM177A1Q8N128 213 aaPredicted RBP27.61■■■□□ 2.01
HLA-C-209ENST00000495835 LMBR1Q8WVP7 490 aa27.61■■■□□ 2.01
HLA-C-209ENST00000495835 AGO4Q9HCK5 861 aaKnown RBP27.61■■■□□ 2.01
HLA-C-209ENST00000495835 ATG7O95352 703 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 ARP10275 920 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 ANAPC15P60006 121 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 FAM26DQ5JW98 314 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 PLPPR4Q7Z2D5 763 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 TRIM22Q8IYM9 498 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 SLC26A6Q9BXS9 759 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 AZI2Q9H6S1 392 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 PKD2L1Q9P0L9 805 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 PRUNE2Q8WUY3 3088 aa27.6■■■□□ 2.01
HLA-C-209ENST00000495835 RRN3P2A6NIE6 340 aa27.59■■■□□ 2.01
HLA-C-209ENST00000495835 CCT2P78371 535 aaKnown RBP27.59■■■□□ 2.01
HLA-C-209ENST00000495835 PLEKHG4Q58EX7 1191 aa27.59■■■□□ 2.01
HLA-C-209ENST00000495835 CPLX2Q6PUV4 134 aaKnown RBP27.59■■■□□ 2.01
HLA-C-209ENST00000495835 PRDM12Q9H4Q4 367 aa27.59■■■□□ 2.01
HLA-C-209ENST00000495835 SLC26A2P50443 739 aa27.58■■■□□ 2.01
HLA-C-209ENST00000495835 ACTR2P61160 394 aa27.58■■■□□ 2.01
HLA-C-209ENST00000495835 SETQ01105 290 aaPredicted RBP27.58■■■□□ 2.01
HLA-C-209ENST00000495835 PPFIA1Q13136 1202 aa27.58■■■□□ 2.01
HLA-C-209ENST00000495835 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.58■■■□□ 2.01
HLA-C-209ENST00000495835 NCOA5Q9HCD5 579 aaKnown RBP27.58■■■□□ 2.01
HLA-C-209ENST00000495835 PDRG1Q9NUG6 133 aa27.58■■■□□ 2.01
HLA-C-209ENST00000495835 IGLV3-22A0A075B6J6 115 aa27.57■■■□□ 2
HLA-C-209ENST00000495835 MBLAC1A4D2B0 266 aaPredicted RBP27.57■■■□□ 2
HLA-C-209ENST00000495835 CPLX1O14810 134 aa27.57■■■□□ 2
HLA-C-209ENST00000495835 MYOGP15173 224 aa27.57■■■□□ 2
HLA-C-209ENST00000495835 SSRP1Q08945 709 aaKnown RBP27.57■■■□□ 2
HLA-C-209ENST00000495835 ITGB3BPQ13352 177 aaPredicted RBP27.57■■■□□ 2
HLA-C-209ENST00000495835 RSPH3Q86UC2 560 aa27.57■■■□□ 2
HLA-C-209ENST00000495835 PLA2G4DQ86XP0 818 aa27.57■■■□□ 2
HLA-C-209ENST00000495835 PCYT2Q99447 389 aa27.57■■■□□ 2
HLA-C-209ENST00000495835 UPF3BQ9BZI7 483 aaKnown RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms