RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 MTUS1Q9ULD2 1270 aa21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 PCDHA6Q9UN73 950 aa21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 PCDHA8Q9Y5H6 950 aa21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 PRRC2BQ5JSZ5 2229 aaKnown RBP21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 NRCAMQ92823 1304 aa21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 TFF2Q03403 129 aa21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 RTN1Q16799 776 aa21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 DHX32Q7L7V1 743 aaKnown RBP21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 SEPT1Q8WYJ6 367 aa21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 TCEANC2Q96MN5 208 aa21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 TGS1Q96RS0 853 aaKnown RBP21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 UHRF1Q96T88 793 aaPredicted RBP21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 INSL6Q9Y581 213 aa21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 UBIAD1Q9Y5Z9 338 aa21.11■□□□□ 0.97
CLCNKA-207ENST00000495784 TRANK1O15050 2925 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 DOCK5Q9H7D0 1870 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 LINC01553A4QN01 128 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 ZBTB43O43298 467 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 LPXNO60711 386 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 CDC45O75419 566 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 NAPAP54920 295 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 ERVK-21P61565 698 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 GDPD5Q8WTR4 605 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 GLG1Q92896 1179 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 JADE2Q9NQC1 790 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 ERAP1Q9NZ08 941 aa21.1■□□□□ 0.97
CLCNKA-207ENST00000495784 CNTNAP5Q8WYK1 1306 aa21.09■□□□□ 0.97
CLCNKA-207ENST00000495784 MARK3P27448 753 aa21.09■□□□□ 0.97
CLCNKA-207ENST00000495784 ADAM17P78536 824 aa21.09■□□□□ 0.97
CLCNKA-207ENST00000495784 PPFIA1Q13136 1202 aa21.09■□□□□ 0.97
CLCNKA-207ENST00000495784 MKRN4PQ13434 485 aaPredicted RBP21.09■□□□□ 0.97
CLCNKA-207ENST00000495784 KRT32Q14532 448 aa21.09■□□□□ 0.97
CLCNKA-207ENST00000495784 WWC2Q6AWC2 1192 aa21.09■□□□□ 0.97
CLCNKA-207ENST00000495784 SUGCTQ9HAC7 445 aa21.09■□□□□ 0.97
CLCNKA-207ENST00000495784 COG5Q9UP83 839 aa21.09■□□□□ 0.97
CLCNKA-207ENST00000495784 GSTTP1A0A1W2PQM5 241 aa21.08■□□□□ 0.97
CLCNKA-207ENST00000495784 MAFGO15525 162 aa21.08■□□□□ 0.97
CLCNKA-207ENST00000495784 EXOSC10Q01780 885 aaKnown RBP21.08■□□□□ 0.97
CLCNKA-207ENST00000495784 PPP1R18Q6NYC8 613 aa21.08■□□□□ 0.97
CLCNKA-207ENST00000495784 TAF2Q6P1X5 1199 aa21.08■□□□□ 0.97
CLCNKA-207ENST00000495784 RASEFQ8IZ41 740 aa21.08■□□□□ 0.97
CLCNKA-207ENST00000495784 SMARCAD1Q9H4L7 1026 aa21.08■□□□□ 0.97
CLCNKA-207ENST00000495784 LMCD1Q9NZU5 365 aa21.08■□□□□ 0.97
CLCNKA-207ENST00000495784 BRPF3Q9ULD4 1205 aa21.08■□□□□ 0.97
CLCNKA-207ENST00000495784 GOLGA8AA7E2F4 631 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 GOLGA8BA8MQT2 603 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 ADCY7P51828 1080 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 FGD1P98174 961 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 ADCK5Q3MIX3 580 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 TSGA10IPQ3SY00 556 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 FAM26DQ5JW98 314 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 RSPH3Q86UC2 560 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 TEX2Q8IWB9 1127 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 APBB2Q92870 758 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 YME1L1Q96TA2 773 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 IFIH1Q9BYX4 1025 aaKnown RBP21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 OSBPL7Q9BZF2 842 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 JPH1Q9HDC5 661 aaPredicted RBP21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 RIC8AQ9NPQ8 531 aa21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 NAP1L2Q9ULW6 460 aaPredicted RBP21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 V9GY48 417 aaPredicted RBP21.07■□□□□ 0.96
CLCNKA-207ENST00000495784 KLF18A0A0U1RQI7 1052 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 UPP2O95045 317 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 FOSP01100 380 aaPredicted RBP21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 HMGB1P09429 215 aaKnown RBP21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 BMP1P13497 986 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 KCNQ1P51787 676 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 HTRA4P83105 476 aaPredicted RBP21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 GRIK4Q16099 956 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 TYW1BQ6NUM6 668 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 HLA-CQ95604 372 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 MXRA8Q9BRK3 442 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 KCNH7Q9NS40 1196 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 TUBE1Q9UJT0 475 aa21.06■□□□□ 0.96
CLCNKA-207ENST00000495784 COL4A4P53420 1690 aaPredicted RBP21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 hCG_1984214I3L0E3 225 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 FUT2Q10981 343 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 RUFY4Q6ZNE9 571 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 RPAINQ86UA6 219 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 ZNF713Q8N859 430 aaPredicted RBP21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 FBXO22Q8NEZ5 403 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 TOP1MTQ969P6 601 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 PGBD1Q96JS3 809 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 SDF4Q9BRK5 362 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 C17orf80Q9BSJ5 609 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 AZI2Q9H6S1 392 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 SLC9A2Q9UBY0 812 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 MICAL3Q7RTP6 2002 aa21.05■□□□□ 0.96
CLCNKA-207ENST00000495784 REV3LO60673 3130 aa21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 SMCO2A6NFE2 343 aa21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 STXBP3O00186 592 aa21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 CHRNA1P02708 482 aa21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 IGBP1P78318 339 aa21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 CYP2W1Q8TAV3 490 aa21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 SP7Q8TDD2 431 aaPredicted RBP21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 NECAB3Q96P71 396 aaPredicted RBP21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 ANO3Q9BYT9 981 aa21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 GLT8D2Q9H1C3 349 aa21.04■□□□□ 0.96
CLCNKA-207ENST00000495784 BARHL2Q9NY43 387 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms