RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 WNT8BQ93098 351 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 SDF4Q9BRK5 362 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 TTYH1Q9H313 450 aaPredicted RBP20.5■□□□□ 0.87
COL20A1-207ENST00000494913 SH3GLB2Q9NR46 395 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 SETD4Q9NVD3 440 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 SLC9A2Q9UBY0 812 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 SLC4A7Q9Y6M7 1214 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 FAM86B1E9PN63 330 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 CYP3A4P08684 503 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 FAM86B2P0C5J1 330 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 PBX2P40425 430 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 TRIM71Q2Q1W2 868 aaKnown RBP20.5■□□□□ 0.87
COL20A1-207ENST00000494913 SERINC5Q86VE9 423 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 CRYGNQ8WXF5 182 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 GLG1Q92896 1179 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 SLKQ9H2G2 1235 aaPredicted RBP20.5■□□□□ 0.87
COL20A1-207ENST00000494913 AGO4Q9HCK5 861 aaKnown RBP20.5■□□□□ 0.87
COL20A1-207ENST00000494913 TPCN1Q9ULQ1 816 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 NFASCO94856 1347 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 TREHO43280 583 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 DEXIO95424 95 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 GNAT1P11488 350 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 ACTN1P12814 892 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 HOXC8P31273 242 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 NLRP5P59047 1200 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 ITGB3BPQ13352 177 aaPredicted RBP20.49■□□□□ 0.87
COL20A1-207ENST00000494913 GPNMBQ14956 572 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 ZNF618Q5T7W0 954 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 NIPA1Q7RTP0 329 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 PLA2G4DQ86XP0 818 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 GUCD1Q96NT3 240 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 PBX4Q9BYU1 374 aa20.49■□□□□ 0.87
COL20A1-207ENST00000494913 MARK3P27448 753 aa20.48■□□□□ 0.87
COL20A1-207ENST00000494913 THPOP40225 353 aa20.48■□□□□ 0.87
COL20A1-207ENST00000494913 SCRN1Q12765 414 aa20.48■□□□□ 0.87
COL20A1-207ENST00000494913 ANKRD1Q15327 319 aa20.48■□□□□ 0.87
COL20A1-207ENST00000494913 TIFAQ96CG3 184 aa20.48■□□□□ 0.87
COL20A1-207ENST00000494913 SMARCAD1Q9H4L7 1026 aa20.48■□□□□ 0.87
COL20A1-207ENST00000494913 ERAP1Q9NZ08 941 aa20.48■□□□□ 0.87
COL20A1-207ENST00000494913 TET1Q8NFU7 2136 aa20.47■□□□□ 0.87
COL20A1-207ENST00000494913 PFKFB2O60825 505 aa20.47■□□□□ 0.87
COL20A1-207ENST00000494913 PARNO95453 639 aaKnown RBP20.47■□□□□ 0.87
COL20A1-207ENST00000494913 AK2P54819 239 aa20.47■□□□□ 0.87
COL20A1-207ENST00000494913 ACTR2P61160 394 aa20.47■□□□□ 0.87
COL20A1-207ENST00000494913 IL17RAQ96F46 866 aa20.47■□□□□ 0.87
COL20A1-207ENST00000494913 UIMC1Q96RL1 719 aa20.47■□□□□ 0.87
COL20A1-207ENST00000494913 MSRAQ9UJ68 235 aa20.47■□□□□ 0.87
COL20A1-207ENST00000494913 STXBP5LQ9Y2K9 1186 aa20.47■□□□□ 0.87
COL20A1-207ENST00000494913 NRCAMQ92823 1304 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 TANC1Q9C0D5 1861 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 IGLV3-22A0A075B6J6 115 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 TMEM265A0A087WTH1 108 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 DDX39AO00148 427 aaKnown RBP20.46■□□□□ 0.87
COL20A1-207ENST00000494913 NBNO60934 754 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 ATP2A2P16615 1042 aaKnown RBP20.46■□□□□ 0.87
COL20A1-207ENST00000494913 TRAF7Q6Q0C0 670 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 LMBR1Q8WVP7 490 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 AIFM3Q96NN9 605 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 PCYT2Q99447 389 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 CDX2Q99626 313 aaPredicted RBP20.46■□□□□ 0.87
COL20A1-207ENST00000494913 AZI2Q9H6S1 392 aa20.46■□□□□ 0.87
COL20A1-207ENST00000494913 CDH23Q9H251 3354 aa20.45■□□□□ 0.86
COL20A1-207ENST00000494913 LGR5O75473 907 aa20.45■□□□□ 0.86
COL20A1-207ENST00000494913 CDKL5O76039 1030 aa20.45■□□□□ 0.86
COL20A1-207ENST00000494913 NEK4P51957 841 aa20.45■□□□□ 0.86
COL20A1-207ENST00000494913 ZNF576Q9H609 170 aa20.45■□□□□ 0.86
COL20A1-207ENST00000494913 PCDHA4Q9UN74 947 aa20.45■□□□□ 0.86
COL20A1-207ENST00000494913 EMSYQ7Z589 1322 aa20.45■□□□□ 0.86
COL20A1-207ENST00000494913 RSPH10B2B2RC85 870 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 IPO5O00410 1097 aaKnown RBP20.44■□□□□ 0.86
COL20A1-207ENST00000494913 DTNBO60941 627 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 CXCL10P02778 98 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 RSPH10BP0C881 870 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 RABGGTBP53611 331 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 ADAM17P78536 824 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 PPFIA1Q13136 1202 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 MBTPS1Q14703 1052 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 RAB30Q15771 203 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 PRR16Q569H4 304 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 ZNF577Q9BSK1 485 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 KAT6AQ92794 2004 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 CHD9Q3L8U1 2897 aa20.44■□□□□ 0.86
COL20A1-207ENST00000494913 RBAK-RBAKDNI3L0D1 243 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 DHX15O43143 795 aaKnown RBP20.43■□□□□ 0.86
COL20A1-207ENST00000494913 CCNE2O96020 404 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 CIITAP33076 1130 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 SETQ01105 290 aaPredicted RBP20.43■□□□□ 0.86
COL20A1-207ENST00000494913 BAIAP3O94812 1187 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 ATG7O95352 703 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 STAT5BP51692 787 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 GRIN2CQ14957 1233 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 GRIK4Q16099 956 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 CNKSR3Q6P9H4 555 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 PLPPR4Q7Z2D5 763 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 BLIDQ8IZY5 108 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 NECAB1Q8N987 351 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 NKX2-4Q9H2Z4 354 aa20.43■□□□□ 0.86
COL20A1-207ENST00000494913 YBX2Q9Y2T7 364 aaKnown RBP20.43■□□□□ 0.86
COL20A1-207ENST00000494913 EDIL3O43854 480 aa20.42■□□□□ 0.86
COL20A1-207ENST00000494913 CTSHP09668 335 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms