RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 TCF7P36402 384 aaPredicted RBP19.45■□□□□ 0.7
SNX17-209ENST00000494893 GUCY1B3Q02153 619 aa19.45■□□□□ 0.7
SNX17-209ENST00000494893 PTPN11Q06124 597 aaPredicted RBP19.45■□□□□ 0.7
SNX17-209ENST00000494893 UTP14CQ5TAP6 766 aaKnown RBP19.45■□□□□ 0.7
SNX17-209ENST00000494893 SEPT1Q8WYJ6 367 aa19.45■□□□□ 0.7
SNX17-209ENST00000494893 TUT1Q9H6E5 874 aaKnown RBP19.45■□□□□ 0.7
SNX17-209ENST00000494893 CCDC194A0A1B0GVG4 234 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 DDX39AO00148 427 aaKnown RBP19.44■□□□□ 0.7
SNX17-209ENST00000494893 IPO5O00410 1097 aaKnown RBP19.44■□□□□ 0.7
SNX17-209ENST00000494893 MSH4O15457 936 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 CYP2C9P11712 490 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 ACTR2P61160 394 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 HMGN5P82970 282 aaKnown RBP19.44■□□□□ 0.7
SNX17-209ENST00000494893 SETQ01105 290 aaPredicted RBP19.44■□□□□ 0.7
SNX17-209ENST00000494893 Q4G0T1 1027 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 PIK3AP1Q6ZUJ8 805 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 DIS3L2Q8IYB7 885 aaKnown RBP19.44■□□□□ 0.7
SNX17-209ENST00000494893 GJA10Q969M2 543 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 ZNF577Q9BSK1 485 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 NOC4LQ9BVI4 516 aaKnown RBP19.44■□□□□ 0.7
SNX17-209ENST00000494893 KATNAL1Q9BW62 490 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 PRKAG2Q9UGJ0 569 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 GTF2IRD1Q9UHL9 959 aa19.44■□□□□ 0.7
SNX17-209ENST00000494893 WNT7AO00755 349 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 SLC37A4O43826 429 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 LGR5O75473 907 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 ATG7O95352 703 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 TIMP1P01033 207 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 HOXC8P31273 242 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 BMP8BP34820 402 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 EPHB4P54760 987 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 ZNF200P98182 395 aaPredicted RBP19.43■□□□□ 0.7
SNX17-209ENST00000494893 DHX38Q92620 1227 aaKnown RBP19.43■□□□□ 0.7
SNX17-209ENST00000494893 SLC5A5Q92911 643 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 SDF4Q9BRK5 362 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 PPP1R12CQ9BZL4 782 aa19.43■□□□□ 0.7
SNX17-209ENST00000494893 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
SNX17-209ENST00000494893 RBAK-RBAKDNI3L0D1 243 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 RAG1P15918 1043 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 CYP2C18P33260 490 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 MOXD1Q6UVY6 613 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 FBXO18Q8NFZ0 1043 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 ETNPPLQ8TBG4 499 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 C8orf76Q96K31 380 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 WNT8AQ9H1J5 351 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 RNPEPQ9H4A4 650 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 EMSYQ7Z589 1322 aa19.42■□□□□ 0.7
SNX17-209ENST00000494893 IGKV6D-21A0A0A0MT36 114 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 SMIM10L2AP0DMW4 78 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 SMIM10L2BP0DMW5 78 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 PTGISQ16647 500 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 LETM2Q2VYF4 491 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 ABHD15Q6UXT9 468 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 NEK8Q86SG6 692 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 C7orf31Q8N865 590 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 WNT8BQ93098 351 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 VWCEQ96DN2 955 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 HIPK3Q9H422 1215 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 TBC1D22BQ9NU19 505 aa19.41■□□□□ 0.7
SNX17-209ENST00000494893 PSMD10O75832 226 aa19.4■□□□□ 0.7
SNX17-209ENST00000494893 SUPT20HL2P0C7V6 817 aa19.4■□□□□ 0.7
SNX17-209ENST00000494893 CUL4AQ13619 759 aa19.4■□□□□ 0.7
SNX17-209ENST00000494893 TRIM29Q14134 588 aa19.4■□□□□ 0.7
SNX17-209ENST00000494893 MFSD5Q6N075 450 aa19.4■□□□□ 0.7
SNX17-209ENST00000494893 B3GNT9Q6UX72 402 aa19.4■□□□□ 0.7
SNX17-209ENST00000494893 LBHD1Q9BQE6 289 aaPredicted RBP19.4■□□□□ 0.7
SNX17-209ENST00000494893 BRMS1Q9HCU9 246 aa19.4■□□□□ 0.7
SNX17-209ENST00000494893 KIF28PB7ZC32 967 aa19.39■□□□□ 0.69
SNX17-209ENST00000494893 ADAM17P78536 824 aa19.39■□□□□ 0.69
SNX17-209ENST00000494893 TRIM71Q2Q1W2 868 aaKnown RBP19.39■□□□□ 0.69
SNX17-209ENST00000494893 HABP4Q5JVS0 413 aaKnown RBP19.39■□□□□ 0.69
SNX17-209ENST00000494893 PPP4R3AQ6IN85 833 aa19.39■□□□□ 0.69
SNX17-209ENST00000494893 C16orf59Q7L2K0 433 aa19.39■□□□□ 0.69
SNX17-209ENST00000494893 CCDC60Q8IWA6 550 aaPredicted RBP19.39■□□□□ 0.69
SNX17-209ENST00000494893 FAM184AQ8NB25 1140 aa19.39■□□□□ 0.69
SNX17-209ENST00000494893 UBE2OQ9C0C9 1292 aaKnown RBP19.39■□□□□ 0.69
SNX17-209ENST00000494893 KCNMB3Q9NPA1 279 aa19.39■□□□□ 0.69
SNX17-209ENST00000494893 SETD4Q9NVD3 440 aa19.39■□□□□ 0.69
SNX17-209ENST00000494893 DDX25Q9UHL0 483 aaKnown RBP19.39■□□□□ 0.69
SNX17-209ENST00000494893 ZNF215Q9UL58 517 aaPredicted RBP19.39■□□□□ 0.69
SNX17-209ENST00000494893 MARK3P27448 753 aa19.38■□□□□ 0.69
SNX17-209ENST00000494893 GJB2P29033 226 aa19.38■□□□□ 0.69
SNX17-209ENST00000494893 CCL23P55773 120 aa19.38■□□□□ 0.69
SNX17-209ENST00000494893 C9orf50Q5SZB4 431 aa19.38■□□□□ 0.69
SNX17-209ENST00000494893 ZNF746Q6NUN9 644 aaPredicted RBP19.38■□□□□ 0.69
SNX17-209ENST00000494893 GLG1Q92896 1179 aa19.38■□□□□ 0.69
SNX17-209ENST00000494893 RIT2Q99578 217 aa19.38■□□□□ 0.69
SNX17-209ENST00000494893 UNC45AQ9H3U1 944 aa19.38■□□□□ 0.69
SNX17-209ENST00000494893 SMARCAD1Q9H4L7 1026 aa19.38■□□□□ 0.69
SNX17-209ENST00000494893 C17orf102A2RUQ5 167 aa19.37■□□□□ 0.69
SNX17-209ENST00000494893 TREHO43280 583 aa19.37■□□□□ 0.69
SNX17-209ENST00000494893 CCNT1O60563 726 aaKnown RBP19.37■□□□□ 0.69
SNX17-209ENST00000494893 CSF2RAP15509 400 aa19.37■□□□□ 0.69
SNX17-209ENST00000494893 GCFC2P16383 781 aaKnown RBP19.37■□□□□ 0.69
SNX17-209ENST00000494893 ATP4AP20648 1035 aa19.37■□□□□ 0.69
SNX17-209ENST00000494893 KRT76Q01546 638 aa19.37■□□□□ 0.69
SNX17-209ENST00000494893 FPGSQ05932 587 aa19.37■□□□□ 0.69
SNX17-209ENST00000494893 PLCB4Q15147 1175 aa19.37■□□□□ 0.69
SNX17-209ENST00000494893 LRCH2Q5VUJ6 765 aa19.37■□□□□ 0.69
SNX17-209ENST00000494893 TRAF7Q6Q0C0 670 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms