RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 LRRC10BA6NIK2 292 aa20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 CCNE1P24864 410 aa20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 CLCN6P51797 869 aa20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 ETF1P62495 437 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 TKFCQ3LXA3 575 aa20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 SNRNP48Q6IEG0 339 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 TTI2Q6NXR4 508 aa20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 EIF2AK1Q9BQI3 630 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 TEX13BQ9BXU2 312 aa20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 TUFT1Q9NNX1 390 aa20.58■□□□□ 0.89
TSPAN4-212ENST00000494815 IPO5O00410 1097 aaKnown RBP20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 EML1O00423 815 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 SSBP05455 408 aaKnown RBP eCLIP20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 IDEP14735 1019 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 ITGB5P18084 799 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 MUTP22033 750 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 SLC12A3P55017 1021 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 FILIP1LQ4L180 1135 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 P2RX5Q93086 422 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 HSD17B14Q9BPX1 270 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 THAP9Q9H5L6 903 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 ADD3Q9UEY8 706 aaKnown RBP20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 UBIAD1Q9Y5Z9 338 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 FHOD1Q9Y613 1164 aa20.58■□□□□ 0.88
TSPAN4-212ENST00000494815 WDR90Q96KV7 1748 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 ARP10275 920 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 CYP11B2P19099 503 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 GPR162Q16538 588 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 SLC30A10Q6XR72 485 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 GPBP1Q86WP2 473 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 GUF1Q8N442 669 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 CDCA5Q96FF9 252 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 TEKT3Q9BXF9 490 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 RIPK3Q9Y572 518 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 OTOFQ9HC10 1997 aa20.57■□□□□ 0.88
TSPAN4-212ENST00000494815 TRIM49BA6NDI0 452 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 SPDYE16A6NNV3 312 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 PMS1P54277 932 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 PPATQ06203 517 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 TMEM132BQ14DG7 1078 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 TCP11X2Q5H9J9 407 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 SPECC1LQ69YQ0 1117 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 XRRA1Q6P2D8 792 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 B3GNT9Q6UX72 402 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 NSMFQ6X4W1 530 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 CCDC65Q8IXS2 484 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 ANKRD13AQ8IZ07 590 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 SYT2Q8N9I0 419 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 IL31RAQ8NI17 732 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 TRIM47Q96LD4 638 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 TAAR1Q96RJ0 339 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 SLC39A2Q9NP94 309 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 ST7Q9NRC1 585 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 GRIN3BO60391 1043 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 ARHGAP29Q52LW3 1261 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 PLCD3Q8N3E9 789 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 RMDN3Q96TC7 470 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 JADE2Q9NQC1 790 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 KCNH7Q9NS40 1196 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 PANK4Q9NVE7 773 aa20.56■□□□□ 0.88
TSPAN4-212ENST00000494815 IQCA1LA6NCM1 817 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 KCNJ18B7U540 433 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 COBLO75128 1261 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 EEF1GP26641 437 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 MRPS9P82933 396 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 COASYQ13057 564 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 KCNJ12Q14500 433 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 PGM5Q15124 567 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 KRT31Q15323 416 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 FOXR2Q6PJQ5 311 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 ERO1BQ86YB8 467 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 PDCD2LQ9BRP1 358 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 PXMP2Q9NR77 195 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 COL11A1P12107 1806 aaPredicted RBP20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 PTPRFP10586 1907 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 CYP4A11Q02928 519 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 CENPPQ6IPU0 288 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 HPS3Q969F9 1004 aa20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 SRRTQ9BXP5 876 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-212ENST00000494815 FRMD3A2A2Y4 597 aa20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 EYA4O95677 639 aa20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 EIF2AK2P19525 551 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 TBX2Q13207 712 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 BAATQ14032 418 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 EPHA7Q15375 998 aa20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 CSGALNACT2Q8N6G5 542 aa20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 PROCA1Q8NCQ7 364 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 NEK9Q8TD19 979 aa20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 DUSP9Q99956 384 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 UNC45AQ9H3U1 944 aa20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 ACAD9Q9H845 621 aa20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 ARGLU1Q9NWB6 273 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 DNAI1Q9UI46 699 aa20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 SCN4AP35499 1836 aa20.54■□□□□ 0.88
TSPAN4-212ENST00000494815 SLITRK3O94933 977 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 PNMA6AP0CW24 399 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 PSMC6P62333 389 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 PABPC4Q13310 644 aaKnown RBP eCLIP20.53■□□□□ 0.883e-8■■■■■ 35.6
TSPAN4-212ENST00000494815 FAM26FQ5R3K3 315 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 TRIM65Q6PJ69 517 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms