RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 UBLCP1Q8WVY7 318 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 DHTKD1Q96HY7 919 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 IFT74Q96LB3 600 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 CENPKQ9BS16 269 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 SPZ1Q9BXG8 430 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 NAA15Q9BXJ9 866 aaKnown RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 DHX36Q9H2U1 1008 aaKnown RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 RNPEPL1Q9HAU8 725 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 DDX21Q9NR30 783 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATG3-207ENST00000494571 NMRK1Q9NWW6 199 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 MTUS1Q9ULD2 1270 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 HYOU1Q9Y4L1 999 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 LRRC42Q9Y546 428 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 PRDM15P57071 1507 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 SH3TC1Q8TE82 1336 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 TLDC2A0PJX2 215 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 F6X3S4 739 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 SPECC1L-ADORA2AF8WAN1 911 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 XPOTO43592 962 aaKnown RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 KDM1AO60341 852 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 ENTPD5O75356 428 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 B3GALNT1O75752 331 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 TJP3O95049 919 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 ASMTLO95671 621 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 APOEP02649 317 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 ZFYP08048 801 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 VAV1P15498 845 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 PFKFB1P16118 471 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 CALB2P22676 271 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 TKTP29401 623 aaKnown RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 TCF7P36402 384 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 PRKCIP41743 596 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 ARFIP2P53365 341 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 NAA20P61599 178 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 ERVK-24P63145 666 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 ATP8B2P98198 1209 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 PDE1BQ01064 536 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 PPP2R5BQ15173 497 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 SAFBQ15424 915 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATG3-207ENST00000494571 PCSK7Q16549 785 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 KRT71Q3SY84 523 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 VWA3BQ502W6 1294 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 EAPPQ56P03 285 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 FAM209AQ5JX71 171 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 METTL21CQ5VZV1 264 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 LLGL2Q6P1M3 1020 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 KLC3Q6P597 504 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 C11orf74Q86VG3 221 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 TMTC1Q8IUR5 882 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 C7orf57Q8NEG2 295 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 MGARPQ8TDB4 240 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 IFT43Q96FT9 208 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 UIMC1Q96RL1 719 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 GPBP1L1Q9HC44 474 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 TRPC7Q9HCX4 862 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 GINM1Q9NU53 330 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 SELENONQ9NZV5 590 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 CIDEBQ9UHD4 219 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 FAF1Q9UNN5 650 aaPredicted RBP4.39□□□□□ -1.71
ATG3-207ENST00000494571 SUGT1Q9Y2Z0 365 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 TRIM17Q9Y577 477 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 CLIC4Q9Y696 253 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 ABCC5O15440 1437 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 SAMD9LQ8IVG5 1584 aa4.39□□□□□ -1.71
ATG3-207ENST00000494571 PNMA6EA0A0J9YXQ4 647 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 H7C1D1 291 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 CPLX1O14810 134 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 TOM1O60784 492 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 DKC1O60832 514 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATG3-207ENST00000494571 MFAP3LO75121 409 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 TBCAO75347 108 aaKnown RBP4.38□□□□□ -1.71
ATG3-207ENST00000494571 HEXIM1O94992 359 aaKnown RBP4.38□□□□□ -1.71
ATG3-207ENST00000494571 OR6B1O95007 311 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 STAMBPO95630 424 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 LDHBP07195 334 aaKnown RBP4.38□□□□□ -1.71
ATG3-207ENST00000494571 GSTA1P08263 222 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 ACADSP16219 412 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 PORP16435 677 aaPredicted RBP4.38□□□□□ -1.71
ATG3-207ENST00000494571 SYKP43405 635 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 COPS2P61201 443 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 GPSM2P81274 684 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 FMR1Q06787 632 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATG3-207ENST00000494571 TTLL12Q14166 644 aaPredicted RBP4.38□□□□□ -1.71
ATG3-207ENST00000494571 CLUL1Q15846 466 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 TMTC4Q5T4D3 741 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 CACNA2D4Q7Z3S7 1137 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 SESTD1Q86VW0 696 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 OSTM1Q86WC4 334 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 IFNL1Q8IU54 200 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 IQCKQ8N0W5 287 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 C8orf58Q8NAV2 365 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 GDAP1Q8TB36 358 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 STK32AQ8WU08 396 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 GPATCH3Q96I76 525 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 CCDC42Q96M95 316 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 TMEM237Q96Q45 408 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 CHP1Q99653 195 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 FAM192AQ9GZU8 254 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 SNX25Q9H3E2 840 aa4.38□□□□□ -1.71
ATG3-207ENST00000494571 OSBPL3Q9H4L5 887 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms