RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MARK3P27448 753 aa14.56□□□□□ -0.08
SKA1-205ENST00000494518 UBE2SQ16763 222 aa14.56□□□□□ -0.08
SKA1-205ENST00000494518 CASC1Q6TDU7 716 aa14.56□□□□□ -0.08
SKA1-205ENST00000494518 SRBD1Q8N5C6 995 aaKnown RBP14.56□□□□□ -0.08
SKA1-205ENST00000494518 MAP4K1Q92918 833 aa14.56□□□□□ -0.08
SKA1-205ENST00000494518 YME1L1Q96TA2 773 aa14.56□□□□□ -0.08
SKA1-205ENST00000494518 SPZ1Q9BXG8 430 aa14.56□□□□□ -0.08
SKA1-205ENST00000494518 USP26Q9BXU7 913 aa14.56□□□□□ -0.08
SKA1-205ENST00000494518 LRRC2Q9BYS8 371 aa14.56□□□□□ -0.08
SKA1-205ENST00000494518 UBE2ZQ9H832 354 aaPredicted RBP14.56□□□□□ -0.08
SKA1-205ENST00000494518 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.55□□□□□ -0.08
SKA1-205ENST00000494518 SH2B2O14492 632 aaPredicted RBP14.55□□□□□ -0.08
SKA1-205ENST00000494518 ATP9AO75110 1047 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 STAM2O75886 525 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 DDAH1O94760 285 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 KCNA5P22460 613 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 KIF5BP33176 963 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 HTRA4P83105 476 aaPredicted RBP14.55□□□□□ -0.08
SKA1-205ENST00000494518 EPC2Q52LR7 807 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 PCNX4Q63HM2 1172 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 RUFY4Q6ZNE9 571 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 CCDC82Q8N4S0 544 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 LMCD1Q9NZU5 365 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 ZNF215Q9UL58 517 aaPredicted RBP14.55□□□□□ -0.08
SKA1-205ENST00000494518 KIAA1671Q9BY89 1806 aa14.55□□□□□ -0.08
SKA1-205ENST00000494518 C5orf42Q9H799 3197 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 FAM86C2PA6NEL3 165 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 CCDC69A6NI79 296 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 CSPG5O95196 566 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 GHRP10912 638 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 GNAT1P11488 350 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 TCF7P36402 384 aaPredicted RBP14.54□□□□□ -0.08
SKA1-205ENST00000494518 NLRX1Q86UT6 975 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 ZBTB10Q96DT7 871 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 C1QTNF1Q9BXJ1 281 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 IFIH1Q9BYX4 1025 aaKnown RBP14.54□□□□□ -0.08
SKA1-205ENST00000494518 CD320Q9NPF0 282 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 TTC3P53804 2025 aa14.54□□□□□ -0.08
SKA1-205ENST00000494518 EVPLQ92817 2033 aa14.53□□□□□ -0.08
SKA1-205ENST00000494518 KCNA2P16389 499 aa14.53□□□□□ -0.08
SKA1-205ENST00000494518 GPM6BQ13491 265 aa14.53□□□□□ -0.08
SKA1-205ENST00000494518 EP400NLQ6ZTU2 488 aa14.53□□□□□ -0.08
SKA1-205ENST00000494518 TOP1MTQ969P6 601 aa14.53□□□□□ -0.08
SKA1-205ENST00000494518 LSG1Q9H089 658 aaKnown RBP14.53□□□□□ -0.08
SKA1-205ENST00000494518 PSTPIP2Q9H939 334 aa14.53□□□□□ -0.08
SKA1-205ENST00000494518 GSTTP1A0A1W2PQM5 241 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 H3BQ06 376 aaPredicted RBP14.52□□□□□ -0.09
SKA1-205ENST00000494518 PIK3CDO00329 1044 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 SLC27A2O14975 620 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 CAND2O75155 1236 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 CHRNA1P02708 482 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 IL9P15248 144 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 ITGB5P18084 799 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 MCM5P33992 734 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 IGBP1P78318 339 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 ADAM17P78536 824 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 PPFIA1Q13136 1202 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 HEATR3Q7Z4Q2 680 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 MICU3Q86XE3 530 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 TMEM192Q8IY95 271 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.52□□□□□ -0.09
SKA1-205ENST00000494518 MRPL38Q96DV4 380 aaKnown RBP14.52□□□□□ -0.09
SKA1-205ENST00000494518 PGBD1Q96JS3 809 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 MAP3K14Q99558 947 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 SENP7Q9BQF6 1050 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 LRFN3Q9BTN0 628 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 MUC6Q6W4X9 2439 aa14.52□□□□□ -0.09
SKA1-205ENST00000494518 NRCAMQ92823 1304 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.51□□□□□ -0.09
SKA1-205ENST00000494518 CTNNB1P35222 781 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 GNAQP50148 359 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 GRIK4Q16099 956 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 TCEAL5Q5H9L2 206 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 FAM26DQ5JW98 314 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 XRRA1Q6P2D8 792 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 SKAP1Q86WV1 359 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 DNAJB3Q8WWF6 145 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 GLG1Q92896 1179 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 GPRASP2Q96D09 838 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 TUBE1Q9UJT0 475 aa14.51□□□□□ -0.09
SKA1-205ENST00000494518 COL4A6Q14031 1691 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 SPDYE3A6NKU9 549 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 MGAT3Q09327 533 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 MTMR1Q13613 665 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 LPIN1Q14693 890 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 PTPROQ16827 1216 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 LEXMQ3ZCV2 418 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 CREB3L3Q68CJ9 461 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 PTCRAQ6ISU1 281 aaPredicted RBP14.5□□□□□ -0.09
SKA1-205ENST00000494518 TMTC3Q6ZXV5 915 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 GIMAP8Q8ND71 665 aaPredicted RBP14.5□□□□□ -0.09
SKA1-205ENST00000494518 BANK1Q8NDB2 785 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 SEPT1Q8WYJ6 367 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 APBB2Q92870 758 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 TMEM87BQ96K49 555 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 TCEANC2Q96MN5 208 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 SAMD11Q96NU1 681 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 ESYT1Q9BSJ8 1104 aa14.5□□□□□ -0.09
SKA1-205ENST00000494518 FAM49AQ9H0Q0 323 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms