RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SMIM22K7EJ46 135 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 ERC2O15083 957 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 PEX10O60683 326 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 GUCY1A2P33402 732 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 GSK3AP49840 483 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 ANKRD45Q5TZF3 282 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 TXNDC11Q6PKC3 985 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 GPRC5AQ8NFJ5 357 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 OTUD7AQ8TE49 926 aaPredicted RBP9.67□□□□□ -0.86
RIF1-211ENST00000494333 C12orf42Q96LP6 360 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 KIAA1683Q9H0B3 1180 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 RNF208Q9H0X6 261 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 TXNRD2Q9NNW7 524 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 ABCB6Q9NP58 842 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 RNF19AQ9NV58 838 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 RBPJLQ9UBG7 517 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 MORF4L1Q9UBU8 362 aa9.67□□□□□ -0.86
RIF1-211ENST00000494333 A0A1W2PRG0 241 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 RNF113AO15541 343 aaKnown RBP9.66□□□□□ -0.86
RIF1-211ENST00000494333 GLRX3O76003 335 aaKnown RBP9.66□□□□□ -0.86
RIF1-211ENST00000494333 CCL5P13501 91 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 ELNP15502 786 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 CDK8P49336 464 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 RAC1P63000 192 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 KCNMA1Q12791 1236 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 CTR9Q6PD62 1173 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 NXPE4Q6UWF7 544 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 CATSPERGQ6ZRH7 1159 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 TMEM179Q6ZVK1 233 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 VN1R5Q7Z5H4 357 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 CCAR1Q8IX12 1150 aaKnown RBP9.66□□□□□ -0.86
RIF1-211ENST00000494333 FMR1NBQ8N0W7 255 aaPredicted RBP9.66□□□□□ -0.86
RIF1-211ENST00000494333 DTWD1Q8N5C7 304 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 APPBP2Q92624 585 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 OSBP2Q969R2 916 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 CCDC17Q96LX7 622 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 STRBPQ96SI9 672 aaKnown RBP9.66□□□□□ -0.86
RIF1-211ENST00000494333 DUSP9Q99956 384 aaKnown RBP9.66□□□□□ -0.86
RIF1-211ENST00000494333 PAGR1Q9BTK6 254 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 OSBPL7Q9BZF2 842 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 GJD2Q9UKL4 321 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 SIPA1L1O43166 1804 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 PHIPQ8WWQ0 1821 aa9.66□□□□□ -0.86
RIF1-211ENST00000494333 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 GSG1L2A8MUP6 293 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 DEAF1O75398 565 aaPredicted RBP9.65□□□□□ -0.86
RIF1-211ENST00000494333 APPP05067 770 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 ZFYP08048 801 aaPredicted RBP9.65□□□□□ -0.86
RIF1-211ENST00000494333 AKR1B1P15121 316 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 VCAM1P19320 739 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 MX1P20591 662 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 ERVK-24P63145 666 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 FGD1P98174 961 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 SETDB1Q15047 1291 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 LRRFIP1Q32MZ4 808 aaKnown RBP9.65□□□□□ -0.86
RIF1-211ENST00000494333 PRRT3Q5FWE3 981 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 C16orf86Q6ZW13 317 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 PI4K2BQ8TCG2 481 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 GCC1Q96CN9 775 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 RPAP3Q9H6T3 665 aaPredicted RBP9.65□□□□□ -0.86
RIF1-211ENST00000494333 ZSWIM8A7E2V4 1837 aa9.65□□□□□ -0.86
RIF1-211ENST00000494333 MINDY4BA8MYZ0 360 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 H3BRJ5 948 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 M0R2C6 588 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 GPAA1O43292 621 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 GJB1P08034 283 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 CYP2B6P20813 491 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 MAPK4P31152 587 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 GJA8P48165 433 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 HDAC1Q13547 482 aaPredicted RBP9.64□□□□□ -0.87
RIF1-211ENST00000494333 COG2Q14746 738 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 CLEC10AQ8IUN9 316 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 SIAH1Q8IUQ4 282 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 STK11IPQ8N1F8 1099 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 U2AF1L4Q8WU68 220 aaKnown RBP9.64□□□□□ -0.87
RIF1-211ENST00000494333 SEC62Q99442 399 aaKnown RBP9.64□□□□□ -0.87
RIF1-211ENST00000494333 FSD1Q9BTV5 496 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 PORCNQ9H237 461 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 PPP4R2Q9NY27 417 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 ARPP21Q9UBL0 812 aaPredicted RBP9.64□□□□□ -0.87
RIF1-211ENST00000494333 RABGAP1Q9Y3P9 1069 aa9.64□□□□□ -0.87
RIF1-211ENST00000494333 MYH1P12882 1939 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 SGPL1O95470 568 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 SPATA31C1P0DKV0 1188 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 GNAT2P19087 354 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 ITPKAP23677 461 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 ICA1Q05084 483 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 SBK1Q52WX2 424 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 KIAA1755Q5JYT7 1200 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 FAM117BQ6P1L5 589 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 GIMAP6Q6P9H5 292 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 GPR142Q7Z601 462 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 FBXO11Q86XK2 927 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 SPICE1Q8N0Z3 855 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 RWDD1Q9H446 243 aaPredicted RBP9.63□□□□□ -0.87
RIF1-211ENST00000494333 KANSL2Q9H9L4 492 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 MKNK2Q9HBH9 465 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 CWC22Q9HCG8 908 aaKnown RBP9.63□□□□□ -0.87
RIF1-211ENST00000494333 HOXC10Q9NYD6 342 aa9.63□□□□□ -0.87
RIF1-211ENST00000494333 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms