RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 SMAD4Q13485 552 aaKnown RBP8.3□□□□□ -1.08
MSL3-217ENST00000494268 SEC23AQ15436 765 aa8.3□□□□□ -1.08
MSL3-217ENST00000494268 VMACQ2NL98 169 aa8.3□□□□□ -1.08
MSL3-217ENST00000494268 CDCA2Q69YH5 1023 aaPredicted RBP8.3□□□□□ -1.08
MSL3-217ENST00000494268 EP400NLQ6ZTU2 488 aa8.3□□□□□ -1.08
MSL3-217ENST00000494268 DDX53Q86TM3 631 aaKnown RBP8.3□□□□□ -1.08
MSL3-217ENST00000494268 LRRC56Q8IYG6 542 aaPredicted RBP8.3□□□□□ -1.08
MSL3-217ENST00000494268 NLGN4XQ8N0W4 816 aa8.3□□□□□ -1.08
MSL3-217ENST00000494268 TTLL11Q8NHH1 800 aa8.3□□□□□ -1.08
MSL3-217ENST00000494268 PDGFDQ9GZP0 370 aaPredicted RBP8.3□□□□□ -1.08
MSL3-217ENST00000494268 PMF1-BGLAPU3KQ54 211 aa8.3□□□□□ -1.08
MSL3-217ENST00000494268 B4E1Z4 1266 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 RFXAPO00287 272 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 TRAF5O00463 557 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 FAHP16930 419 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 PTPN1P18031 435 aaKnown RBP8.29□□□□□ -1.08
MSL3-217ENST00000494268 HTRA3P83110 453 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 CFAP100Q494V2 611 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 CPZQ66K79 652 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 CIAPIN1Q6FI81 312 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 HHIPL2Q6UWX4 724 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 LRRTM3Q86VH5 581 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 PROSER1Q86XN7 944 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 C1QL4Q86Z23 238 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 ADGRG2Q8IZP9 1017 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 C2orf69Q8N8R5 385 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 ZBTB8AQ96BR9 441 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 WNK4Q96J92 1243 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 C11orf84Q9BUA3 381 aaPredicted RBP8.29□□□□□ -1.08
MSL3-217ENST00000494268 MTFR1LQ9H019 292 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 INTS7Q9NVH2 962 aaKnown RBP8.29□□□□□ -1.08
MSL3-217ENST00000494268 RIC8BQ9NVN3 520 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 ATP23Q9Y6H3 246 aa8.29□□□□□ -1.08
MSL3-217ENST00000494268 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.28□□□□□ -1.08
MSL3-217ENST00000494268 NPTXRO95502 500 aa8.28□□□□□ -1.08
MSL3-217ENST00000494268 MECP2P51608 486 aaKnown RBP8.28□□□□□ -1.08
MSL3-217ENST00000494268 TM4SF20Q53R12 229 aa8.28□□□□□ -1.08
MSL3-217ENST00000494268 FIGNQ5HY92 759 aa8.28□□□□□ -1.08
MSL3-217ENST00000494268 TMC5Q6UXY8 1006 aa8.28□□□□□ -1.08
MSL3-217ENST00000494268 UBE2R2Q712K3 238 aaPredicted RBP8.28□□□□□ -1.08
MSL3-217ENST00000494268 DDX1Q92499 740 aaKnown RBP8.28□□□□□ -1.08
MSL3-217ENST00000494268 TOX2Q96NM4 488 aa8.28□□□□□ -1.08
MSL3-217ENST00000494268 NGRNQ9NPE2 291 aaKnown RBP8.28□□□□□ -1.08
MSL3-217ENST00000494268 SCDO00767 359 aa8.27□□□□□ -1.09
MSL3-217ENST00000494268 AFF3P51826 1226 aaKnown RBP8.27□□□□□ -1.09
MSL3-217ENST00000494268 NEK4P51957 841 aa8.27□□□□□ -1.09
MSL3-217ENST00000494268 ITGA1P56199 1179 aa8.27□□□□□ -1.09
MSL3-217ENST00000494268 LIPIQ6XZB0 460 aa8.27□□□□□ -1.09
MSL3-217ENST00000494268 NOSTRINQ8IVI9 506 aa8.27□□□□□ -1.09
MSL3-217ENST00000494268 LINC00482Q8N8I6 264 aa8.27□□□□□ -1.09
MSL3-217ENST00000494268 ZNF526Q8TF50 670 aaPredicted RBP8.27□□□□□ -1.09
MSL3-217ENST00000494268 TARS2Q9BW92 718 aaKnown RBP8.27□□□□□ -1.09
MSL3-217ENST00000494268 SPATA6Q9NWH7 488 aaPredicted RBP8.27□□□□□ -1.09
MSL3-217ENST00000494268 HSPBP1Q9NZL4 362 aa8.27□□□□□ -1.09
MSL3-217ENST00000494268 PLAAQ9Y263 795 aa8.27□□□□□ -1.09
MSL3-217ENST00000494268 FFAR3O14843 346 aa8.26□□□□□ -1.09
MSL3-217ENST00000494268 KPNA6O60684 536 aa8.26□□□□□ -1.09
MSL3-217ENST00000494268 CLASP2O75122 1294 aaKnown RBP8.26□□□□□ -1.09
MSL3-217ENST00000494268 ZBTB48P10074 688 aaPredicted RBP8.26□□□□□ -1.09
MSL3-217ENST00000494268 YBX3P16989 372 aaKnown RBP eCLIP8.26□□□□□ -1.09
MSL3-217ENST00000494268 FLT3P36888 993 aa8.26□□□□□ -1.09
MSL3-217ENST00000494268 DLX2Q07687 328 aaPredicted RBP8.26□□□□□ -1.09
MSL3-217ENST00000494268 ADAM9Q13443 819 aa8.26□□□□□ -1.09
MSL3-217ENST00000494268 RTP5Q14D33 572 aa8.26□□□□□ -1.09
MSL3-217ENST00000494268 PCBP1Q15365 356 aaKnown RBP eCLIP8.26□□□□□ -1.09
MSL3-217ENST00000494268 VWA3BQ502W6 1294 aa8.26□□□□□ -1.09
MSL3-217ENST00000494268 PHF19Q5T6S3 580 aa8.26□□□□□ -1.09
MSL3-217ENST00000494268 KYQ8NBH2 561 aa8.26□□□□□ -1.09
MSL3-217ENST00000494268 MFSD3Q96ES6 412 aa8.26□□□□□ -1.09
MSL3-217ENST00000494268 A0A087X0B3 334 aa8.25□□□□□ -1.09
MSL3-217ENST00000494268 A0A1B0GTL3 188 aa8.25□□□□□ -1.09
MSL3-217ENST00000494268 SLC12A8A0AV02 714 aa8.25□□□□□ -1.09
MSL3-217ENST00000494268 KRT37O76014 449 aa8.25□□□□□ -1.09
MSL3-217ENST00000494268 C4BPAP04003 597 aaKnown RBP8.25□□□□□ -1.09
MSL3-217ENST00000494268 CD276Q5ZPR3 534 aa8.25□□□□□ -1.09
MSL3-217ENST00000494268 EGFLAMQ63HQ2 1017 aa8.25□□□□□ -1.09
MSL3-217ENST00000494268 OTOP1Q7RTM1 612 aa8.25□□□□□ -1.09
MSL3-217ENST00000494268 SAPCD2Q86UD0 394 aa8.25□□□□□ -1.09
MSL3-217ENST00000494268 ZSWIM3Q96MP5 696 aa8.25□□□□□ -1.09
MSL3-217ENST00000494268 PTPDC1A2A3K4 754 aa8.24□□□□□ -1.09
MSL3-217ENST00000494268 CBX4O00257 560 aa8.24□□□□□ -1.09
MSL3-217ENST00000494268 MYCLP1P12525 358 aaPredicted RBP8.24□□□□□ -1.09
MSL3-217ENST00000494268 POU3F2P20265 443 aaPredicted RBP8.24□□□□□ -1.09
MSL3-217ENST00000494268 THBS2P35442 1172 aa8.24□□□□□ -1.09
MSL3-217ENST00000494268 SKOR2Q2VWA4 1001 aaPredicted RBP8.24□□□□□ -1.09
MSL3-217ENST00000494268 TCERG1LQ5VWI1 586 aa8.24□□□□□ -1.09
MSL3-217ENST00000494268 PKN3Q6P5Z2 889 aa8.24□□□□□ -1.09
MSL3-217ENST00000494268 TP53I13Q8NBR0 393 aaPredicted RBP8.24□□□□□ -1.09
MSL3-217ENST00000494268 CHST14Q8NCH0 376 aa8.24□□□□□ -1.09
MSL3-217ENST00000494268 PCDH18Q9HCL0 1135 aa8.24□□□□□ -1.09
MSL3-217ENST00000494268 CADPSQ9ULU8 1353 aa8.23□□□□□ -1.09
MSL3-217ENST00000494268 IRF9Q00978 393 aa8.23□□□□□ -1.09
MSL3-217ENST00000494268 PFKPQ01813 784 aa8.23□□□□□ -1.09
MSL3-217ENST00000494268 DBPQ10586 325 aaPredicted RBP8.23□□□□□ -1.09
MSL3-217ENST00000494268 LCNL1Q6ZST4 164 aa8.23□□□□□ -1.09
MSL3-217ENST00000494268 NXPE1Q8N323 547 aa8.23□□□□□ -1.09
MSL3-217ENST00000494268 DLG3Q92796 817 aa8.23□□□□□ -1.09
MSL3-217ENST00000494268 CABP5Q9NP86 173 aa8.23□□□□□ -1.09
MSL3-217ENST00000494268 SLC39A2Q9NP94 309 aa8.23□□□□□ -1.09
MSL3-217ENST00000494268 B4GALT6Q9UBX8 382 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms