RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 RBM28Q9NW13 759 aaKnown RBP9.8□□□□□ -0.84
LRCH3-219ENST00000494069 MSRAQ9UJ68 235 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 UBIAD1Q9Y5Z9 338 aa9.8□□□□□ -0.84
LRCH3-219ENST00000494069 GBF1Q92538 1859 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 GSTTP1A0A1W2PQM5 241 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 C17orf102A2RUQ5 167 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 SPDYE3A6NKU9 549 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 HMGB1P09429 215 aaKnown RBP9.79□□□□□ -0.84
LRCH3-219ENST00000494069 RPS6KB1P23443 525 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 PSEN1P49768 467 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 FGD1P98174 961 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 RAB30Q15771 203 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 BLOC1S2Q6QNY1 142 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 SPRED2Q7Z698 418 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.79□□□□□ -0.84
LRCH3-219ENST00000494069 AFAP1L1Q8TED9 768 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 ATP6V0A1Q93050 837 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 GPRASP2Q96D09 838 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 SENP7Q9BQF6 1050 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 LARP6Q9BRS8 491 aaKnown RBP9.79□□□□□ -0.84
LRCH3-219ENST00000494069 CERS4Q9HA82 394 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 RIC8AQ9NPQ8 531 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 JADE2Q9NQC1 790 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 PRDM6Q9NQX0 595 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 SETD4Q9NVD3 440 aa9.79□□□□□ -0.84
LRCH3-219ENST00000494069 MYO9BQ13459 2157 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 SMCO2A6NFE2 343 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 RFXAPO00287 272 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 DLL1O00548 723 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 SEC24BO95487 1268 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 CXCL10P02778 98 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 CA3P07451 260 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 ARP10275 920 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 ACTN1P12814 892 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 MARK3P27448 753 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 HOXC8P31273 242 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 TCF7P36402 384 aaPredicted RBP9.78□□□□□ -0.84
LRCH3-219ENST00000494069 THPOP40225 353 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 METAP2P50579 478 aaKnown RBP eCLIP9.78□□□□□ -0.84
LRCH3-219ENST00000494069 ADCY7P51828 1080 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 DEFB103AP81534 67 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 MTMR1Q13613 665 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 PKN1Q16512 942 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 SERINC5Q86VE9 423 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 HERC6Q8IVU3 1022 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 CCDC155Q8N6L0 562 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 PPM1EQ8WY54 764 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 PHKBQ93100 1093 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 ZBTB10Q96DT7 871 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 UIMC1Q96RL1 719 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 ANO3Q9BYT9 981 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 SLC28A3Q9HAS3 691 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 BARHL2Q9NY43 387 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 PCDHA11Q9Y5I1 949 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 TANC1Q9C0D5 1861 aa9.78□□□□□ -0.84
LRCH3-219ENST00000494069 LCHNA4D1U4 455 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 EPOPA6NHQ4 379 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 REC8O95072 547 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 CTSHP09668 335 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 CLK2P49760 499 aaKnown RBP9.77□□□□□ -0.85
LRCH3-219ENST00000494069 WDR5P61964 334 aaKnown RBP9.77□□□□□ -0.85
LRCH3-219ENST00000494069 CCT2P78371 535 aaKnown RBP9.77□□□□□ -0.85
LRCH3-219ENST00000494069 ADAM17P78536 824 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 ARHGAP4P98171 946 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 PFKFB3Q16875 520 aaPredicted RBP9.77□□□□□ -0.85
LRCH3-219ENST00000494069 IER5LQ5T953 404 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 JAKMIP3Q5VZ66 844 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 PPP2R2DQ66LE6 453 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.77□□□□□ -0.85
LRCH3-219ENST00000494069 SEPT1Q8WYJ6 367 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
LRCH3-219ENST00000494069 PCYT2Q99447 389 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 MXRA8Q9BRK3 442 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 AGXT2Q9BYV1 514 aa9.77□□□□□ -0.85
LRCH3-219ENST00000494069 NCOA5Q9HCD5 579 aaKnown RBP9.77□□□□□ -0.85
LRCH3-219ENST00000494069 RSPH10B2B2RC85 870 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 DTNBO60941 627 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 NEFLP07196 543 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 RSPH10BP0C881 870 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 SCG2P13521 617 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 IGFBP4P22692 258 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 PDIA3P30101 505 aaKnown RBP9.76□□□□□ -0.85
LRCH3-219ENST00000494069 RCAN1P53805 252 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 ITGB3BPQ13352 177 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-219ENST00000494069 TOB2Q14106 344 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-219ENST00000494069 CCDC85BQ15834 202 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-219ENST00000494069 NTRK3Q16288 839 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 PPP1R18Q6NYC8 613 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 FAM117BQ6P1L5 589 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 CNKSR3Q6P9H4 555 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 RUFY4Q6ZNE9 571 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 DBF4BQ8NFT6 615 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 PHOSPHO2Q8TCD6 241 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 LMBR1Q8WVP7 490 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 CDHR1Q96JP9 859 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 SLC9A7Q96T83 725 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 AGO4Q9HCK5 861 aaKnown RBP9.76□□□□□ -0.85
LRCH3-219ENST00000494069 KCNH7Q9NS40 1196 aa9.76□□□□□ -0.85
LRCH3-219ENST00000494069 PTPRSQ13332 1948 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms