RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 CDHR1Q96JP9 859 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 MXRA8Q9BRK3 442 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 COL25A1Q9BXS0 654 aaPredicted RBP11.17□□□□□ -0.62
UFD1-210ENST00000494054 AGXT2Q9BYV1 514 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 KCNH7Q9NS40 1196 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 ZNF215Q9UL58 517 aaPredicted RBP11.17□□□□□ -0.62
UFD1-210ENST00000494054 PTPRSQ13332 1948 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 CHD9Q3L8U1 2897 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 ABHD14A-ACY1A0A1B0GW23 586 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 LCHNA4D1U4 455 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 EPOPA6NHQ4 379 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 MAFGO15525 162 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 PPFIA3O75145 1194 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 LGR5O75473 907 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 REC8O95072 547 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 FOSP01100 380 aaPredicted RBP11.16□□□□□ -0.62
UFD1-210ENST00000494054 CTSHP09668 335 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 KCNJ6P48051 423 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 ARHGAP4P98171 946 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 TAP1Q03518 808 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 ITGB3BPQ13352 177 aaPredicted RBP11.16□□□□□ -0.62
UFD1-210ENST00000494054 CCDC85BQ15834 202 aaPredicted RBP11.16□□□□□ -0.62
UFD1-210ENST00000494054 PKN1Q16512 942 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
UFD1-210ENST00000494054 JAKMIP3Q5VZ66 844 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 FBXL16Q8N461 479 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
UFD1-210ENST00000494054 DBF4BQ8NFT6 615 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 SEPT1Q8WYJ6 367 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 PCYT2Q99447 389 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 ANO3Q9BYT9 981 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 NID2Q14112 1375 aa11.16□□□□□ -0.62
UFD1-210ENST00000494054 CCDC196A0A1B0GTZ2 297 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 MEIS1O00470 390 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
UFD1-210ENST00000494054 TLL1O43897 1013 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 GNAT1P11488 350 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 SCG2P13521 617 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 MARK3P27448 753 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 SREBF1P36956 1147 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 MKRN4PQ13434 485 aaPredicted RBP11.15□□□□□ -0.62
UFD1-210ENST00000494054 IKBKEQ14164 716 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 NTRK3Q16288 839 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 CEP55Q53EZ4 464 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.15□□□□□ -0.62
UFD1-210ENST00000494054 RUFY4Q6ZNE9 571 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 TEX2Q8IWB9 1127 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 PHKBQ93100 1093 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 EHMT1Q9H9B1 1298 aa11.15□□□□□ -0.62
UFD1-210ENST00000494054 AGO4Q9HCK5 861 aaKnown RBP11.15□□□□□ -0.62
UFD1-210ENST00000494054 EMSYQ7Z589 1322 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 NRCAMQ92823 1304 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 KIF28PB7ZC32 967 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 FAM86B1E9PN63 330 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 GJB5O95377 273 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 NEFLP07196 543 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 FAM86B2P0C5J1 330 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 PSMA5P28066 241 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 PDIA3P30101 505 aaKnown RBP11.14□□□□□ -0.63
UFD1-210ENST00000494054 EVCP57679 992 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 CCT2P78371 535 aaKnown RBP11.14□□□□□ -0.63
UFD1-210ENST00000494054 PPFIA1Q13136 1202 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 AP3B2Q13367 1082 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 TOB2Q14106 344 aaPredicted RBP11.14□□□□□ -0.63
UFD1-210ENST00000494054 PLEKHG4Q58EX7 1191 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 FAM26DQ5JW98 314 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 MARCH8Q5T0T0 291 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 FAM117BQ6P1L5 589 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 CRYGNQ8WXF5 182 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 ARNTL2Q8WYA1 636 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 GLG1Q92896 1179 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 UIMC1Q96RL1 719 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 ZBED2Q9BTP6 218 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 SMARCAD1Q9H4L7 1026 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 NCOA5Q9HCD5 579 aaKnown RBP11.14□□□□□ -0.63
UFD1-210ENST00000494054 ZSWIM6Q9HCJ5 1215 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 JPH1Q9HDC5 661 aaPredicted RBP11.14□□□□□ -0.63
UFD1-210ENST00000494054 ERAP1Q9NZ08 941 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
UFD1-210ENST00000494054 NFASCO94856 1347 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 IGLV3-22A0A075B6J6 115 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 ESYT2A0FGR8 921 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 EFCAB14O75071 495 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 CAND2O75155 1236 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 CCNE2O96020 404 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 CHRNA1P02708 482 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 INSRRP14616 1297 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 ZNF76P36508 570 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 ACTR2P61160 394 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 GRIK4Q16099 956 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 KRT40Q6A162 431 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 RUFY3Q7L099 469 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 SDF4Q9BRK5 362 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 LARP6Q9BRS8 491 aaKnown RBP11.13□□□□□ -0.63
UFD1-210ENST00000494054 ZMYND12Q9H0C1 365 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 GLT8D2Q9H1C3 349 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 MTCH2Q9Y6C9 303 aa11.13□□□□□ -0.63
UFD1-210ENST00000494054 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms