RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 CHMP2AO43633 222 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 ARIH2O95376 493 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 C6orf222P0C671 652 aaPredicted RBP16.77■□□□□ 0.28
ACTB-213ENST00000493945 MARCKSP29966 332 aaPredicted RBP16.77■□□□□ 0.28
ACTB-213ENST00000493945 CCND3P30281 292 aaPredicted RBP16.77■□□□□ 0.28
ACTB-213ENST00000493945 UBA7P41226 1012 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 TECP42680 631 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 ITGB3BPQ13352 177 aaPredicted RBP16.77■□□□□ 0.28
ACTB-213ENST00000493945 KCTD17Q8N5Z5 321 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
ACTB-213ENST00000493945 CALML4Q96GE6 196 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 ZNF333Q96JL9 665 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.28
ACTB-213ENST00000493945 KATNAL1Q9BW62 490 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 NT5C3AQ9H0P0 336 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 DISC1Q9NRI5 854 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 CCDC39Q9UFE4 941 aa16.77■□□□□ 0.28
ACTB-213ENST00000493945 GNEQ9Y223 722 aaKnown RBP16.77■□□□□ 0.28
ACTB-213ENST00000493945 WNT7AO00755 349 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 DYNC1LI2O43237 492 aaPredicted RBP16.76■□□□□ 0.27
ACTB-213ENST00000493945 EDIL3O43854 480 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 ATP9AO75110 1047 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 CCL5P13501 91 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 MUTP22033 750 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 SLC26A2P50443 739 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 GJA9P57773 515 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 ACTR2P61160 394 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 SP4Q02446 784 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 ARHGAP1Q07960 439 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 TRIM32Q13049 653 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 FSCN1Q16658 493 aaKnown RBP16.76■□□□□ 0.27
ACTB-213ENST00000493945 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 C4orf32Q8N8J7 132 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 TRPV1Q8NER1 839 aa16.76■□□□□ 0.27
ACTB-213ENST00000493945 FTOQ9C0B1 505 aaKnown RBP eCLIP16.76■□□□□ 0.27
ACTB-213ENST00000493945 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.75■□□□□ 0.27
ACTB-213ENST00000493945 KBTBD13C9JR72 458 aa16.75■□□□□ 0.27
ACTB-213ENST00000493945 PPFIA4O75335 1185 aa16.75■□□□□ 0.27
ACTB-213ENST00000493945 EPHA7Q15375 998 aa16.75■□□□□ 0.27
ACTB-213ENST00000493945 IGSF22Q8N9C0 903 aa16.75■□□□□ 0.27
ACTB-213ENST00000493945 FAM167AQ96KS9 214 aa16.75■□□□□ 0.27
ACTB-213ENST00000493945 MCOLN1Q9GZU1 580 aa16.75■□□□□ 0.27
ACTB-213ENST00000493945 UPF3AQ9H1J1 476 aaKnown RBP16.75■□□□□ 0.27
ACTB-213ENST00000493945 UNC45AQ9H3U1 944 aa16.75■□□□□ 0.27
ACTB-213ENST00000493945 PAK6Q9NQU5 681 aaPredicted RBP16.75■□□□□ 0.27
ACTB-213ENST00000493945 FBXO2Q9UK22 296 aaPredicted RBP16.75■□□□□ 0.27
ACTB-213ENST00000493945 VAV3Q9UKW4 847 aa16.75■□□□□ 0.27
ACTB-213ENST00000493945 EMSYQ7Z589 1322 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 SYNRGQ9UMZ2 1314 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 POTEMA6NI47 508 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 DHX15O43143 795 aaKnown RBP16.74■□□□□ 0.27
ACTB-213ENST00000493945 CABYRO75952 493 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 P4HBP07237 508 aaKnown RBP16.74■□□□□ 0.27
ACTB-213ENST00000493945 MMP3P08254 477 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 SUPT20HL2P0C7V6 817 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 CST5P28325 142 aaPredicted RBP16.74■□□□□ 0.27
ACTB-213ENST00000493945 TCF7P36402 384 aaPredicted RBP16.74■□□□□ 0.27
ACTB-213ENST00000493945 SP2Q02086 613 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 GNASQ5JWF2 1037 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 ADALQ6DHV7 355 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 SNX29Q8TEQ0 813 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 AFG1LQ8WV93 481 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 GLG1Q92896 1179 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 GPR20Q99678 358 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 UNC93B1Q9H1C4 597 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 SMARCAD1Q9H4L7 1026 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 TUFT1Q9NNX1 390 aa16.74■□□□□ 0.27
ACTB-213ENST00000493945 A0A1W2PQ27 194 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 A0A1W2PQ64 194 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 A0A1W2PQD8 194 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 MOXD2PA6NHM9 499 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 A6NJR5 290 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 DDX11L8A8MPP1 907 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
ACTB-213ENST00000493945 CCT6AP40227 531 aaKnown RBP16.73■□□□□ 0.27
ACTB-213ENST00000493945 PSMC5P62195 406 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 NKX3-2P78367 333 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 CCDC73Q6ZRK6 1079 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 TMEM87AQ8NBN3 555 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 COPS5Q92905 334 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 TSEN34Q9BSV6 310 aaKnown RBP16.73■□□□□ 0.27
ACTB-213ENST00000493945 ZSWIM4Q9H7M6 989 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 ZNF302Q9NR11 478 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 ERAP1Q9NZ08 941 aa16.73■□□□□ 0.27
ACTB-213ENST00000493945 SORBS3O60504 671 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 GJB1P08034 283 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 QARSP47897 775 aaKnown RBP16.72■□□□□ 0.27
ACTB-213ENST00000493945 STAT5BP51692 787 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 HSDL1Q3SXM5 330 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 PDXDC2PQ6P474 469 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 CABP7Q86V35 215 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 CKAP2LQ8IYA6 745 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 AFAP1L1Q8TED9 768 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
ACTB-213ENST00000493945 DEFB118Q96PH6 123 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 UIMC1Q96RL1 719 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 POLR3CQ9BUI4 534 aaPredicted RBP16.72■□□□□ 0.27
ACTB-213ENST00000493945 SEZ6LQ9BYH1 1024 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 CSRNP2Q9H175 543 aa16.72■□□□□ 0.27
ACTB-213ENST00000493945 PCDHA7Q9UN72 937 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms