RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 TUFT1Q9NNX1 390 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 JADE2Q9NQC1 790 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 TRIM10Q9UDY6 481 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 L1RE1Q9UN81 338 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 TBCAO75347 108 aaKnown RBP10.64□□□□□ -0.71
NPHP3-209ENST00000493732 MED24O75448 989 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 EYA4O95677 639 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 GH2P01242 217 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 RHOXF2BP0C7M4 288 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 CYP27A1Q02318 531 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 GIT2Q14161 759 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 KNOP1Q1ED39 458 aaKnown RBP10.64□□□□□ -0.71
NPHP3-209ENST00000493732 BMT2Q1RMZ1 405 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 HSP90B2PQ58FF3 399 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 FAM83BQ5T0W9 1011 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 FKBP1CQ5VVH2 108 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 STXBP4Q6ZWJ1 553 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 ZNF572Q7Z3I7 529 aaPredicted RBP10.64□□□□□ -0.71
NPHP3-209ENST00000493732 FMNL3Q8IVF7 1028 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 C7orf43Q8WVR3 580 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 NOX5Q96PH1 765 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 RHOXF2Q9BQY4 288 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 VPS33BQ9H267 617 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 TDRD3Q9H7E2 651 aaKnown RBP10.64□□□□□ -0.71
NPHP3-209ENST00000493732 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.64□□□□□ -0.71
NPHP3-209ENST00000493732 KCNQ5Q9NR82 932 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 KCND2Q9NZV8 630 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 PRDM4Q9UKN5 801 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 SNX12Q9UMY4 172 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 ARFGEF1Q9Y6D6 1849 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 ADAMTSL1Q8N6G6 1762 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 MACROD2A1Z1Q3 448 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 FAM196BA6NMK8 535 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 ENC1O14682 589 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 SLC16A3O15427 465 aaKnown RBP10.63□□□□□ -0.71
NPHP3-209ENST00000493732 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
NPHP3-209ENST00000493732 SASH3O75995 380 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 GDF11O95390 407 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 ASTE1Q2TB18 679 aaPredicted RBP10.63□□□□□ -0.71
NPHP3-209ENST00000493732 FAM160B2Q86V87 743 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 OGFOD1Q8N543 542 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 FAM151AQ8WW52 585 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 LENG9Q96B70 501 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 PNKPQ96T60 521 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 PLCB1Q9NQ66 1216 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 OLFML3Q9NRN5 406 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 AIPL1Q9NZN9 384 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 SEL1LQ9UBV2 794 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 ARMCX3Q9UH62 379 aaPredicted RBP10.63□□□□□ -0.71
NPHP3-209ENST00000493732 PRR12Q9ULL5 1215 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 TMX2Q9Y320 296 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 MRPL11Q9Y3B7 192 aaKnown RBP10.63□□□□□ -0.71
NPHP3-209ENST00000493732 DAAM1Q9Y4D1 1078 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 HYOU1Q9Y4L1 999 aa10.63□□□□□ -0.71
NPHP3-209ENST00000493732 RCCD1A6NED2 376 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 GCOM1H8Y6P7 765 aaPredicted RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 PPIP5K2O43314 1243 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 POLR2MP0CAP2 368 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 SPATA31C1P0DKV0 1188 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 NR2F2P24468 414 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 OAS2P29728 719 aaKnown RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 PAFAH1B1P43034 410 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 KCNMA1Q12791 1236 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 SLC15A2Q16348 729 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 AOC3Q16853 763 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 USH1GQ495M9 461 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 TDRD12Q587J7 1177 aaKnown RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 ARSHQ5FYA8 562 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 EPM2AIP1Q7L775 607 aaPredicted RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 WDR11Q9BZH6 1224 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 ZHX3Q9H4I2 956 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 ABCB6Q9NP58 842 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 MED4Q9NPJ6 270 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 TYW1Q9NV66 732 aaKnown RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 FBXL5Q9UKA1 691 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 RGPD3A6NKT7 1758 aaPredicted RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 RGPD4Q7Z3J3 1758 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 ATP8B3O60423 1300 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 UBE4BO95155 1302 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 POTEFA5A3E0 1075 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 FAM86B1E9PN63 330 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 ZNF263O14978 683 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 EIF3DO15371 548 aaKnown RBP eCLIP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 MSH4O15457 936 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 TBC1D12O60347 775 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 AFPP02771 609 aaKnown RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 FAM86B2P0C5J1 330 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 POTEIP0CG38 1075 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 XRCC5P13010 732 aaKnown RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 VSNL1P62760 191 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 SETQ01105 290 aaPredicted RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 DLGAP5Q15398 846 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 NFIL3Q16649 462 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 IFI16Q16666 785 aaKnown RBP10.62□□□□□ -0.71
NPHP3-209ENST00000493732 POTEGQ6S5H5 508 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 POTEEQ6S8J3 1075 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 KRT26Q7Z3Y9 468 aa10.62□□□□□ -0.71
NPHP3-209ENST00000493732 NELFCDQ8IXH7 590 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms