RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 SPIRE1Q08AE8 756 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 NONOQ15233 471 aaKnown RBP eCLIP10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 GNASQ5JWF2 1037 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 SPECC1Q5M775 1068 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 B3GNT9Q6UX72 402 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 CXCL17Q6UXB2 119 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 NEK8Q86SG6 692 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 FCHSD1Q86WN1 690 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 POTEDQ86YR6 584 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 ETNPPLQ8TBG4 499 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 CCDC12Q8WUD4 166 aaPredicted RBP10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 BADQ92934 168 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 ZNF396Q96N95 335 aaPredicted RBP10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 MMTAG2Q9BU76 263 aaKnown RBP10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 ADD3Q9UEY8 706 aaKnown RBP10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 HPSEQ9Y251 543 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 UBIAD1Q9Y5Z9 338 aa10.28□□□□□ -0.76
TM4SF1-203ENST00000493298 CCDC194A0A1B0GVG4 234 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 A6NJR5 290 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 PP2D1A8MPX8 630 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 ARVCFO00192 962 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 MEIS1O00470 390 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 SPTLC2O15270 562 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 DHX15O43143 795 aaKnown RBP10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 CLTBP09497 229 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 ARP10275 920 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 HOXD8P13378 290 aaPredicted RBP10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 USP11P51784 963 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 PURAQ00577 322 aaKnown RBP10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 ARHGAP1Q07960 439 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 AP3B2Q13367 1082 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 PGM5Q15124 567 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 LETM2Q2VYF4 491 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 PPP4R3AQ6IN85 833 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 VSIG10LQ86VR7 867 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 PCSK9Q8NBP7 692 aaKnown RBP10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 SPATA32Q96LK8 384 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 PDCD2LQ9BRP1 358 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 WDR11Q9BZH6 1224 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 STARD7Q9NQZ5 370 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 PXMP2Q9NR77 195 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 SRPRBQ9Y5M8 271 aaKnown RBP10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 NCOR1O75376 2440 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 UMODL1Q5DID0 1318 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 BRWD1Q9NSI6 2320 aa10.27□□□□□ -0.77
TM4SF1-203ENST00000493298 MICAL3Q7RTP6 2002 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 MSH4O15457 936 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 DYNC1LI2O43237 492 aaPredicted RBP10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 PQBP1O60828 265 aaKnown RBP10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 ATP9AO75110 1047 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 FOSP01100 380 aaPredicted RBP10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 MYCNP04198 464 aaPredicted RBP10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 CDC25AP30304 524 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 PSMC6P62333 389 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 SP2Q02086 613 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 SHHQ15465 462 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 ECM1Q16610 540 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 Q4G0T1 1027 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 RASIP1Q5U651 963 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 RESP18Q5W5W9 173 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 ADALQ6DHV7 355 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 TEX2Q8IWB9 1127 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 FMR1NBQ8N0W7 255 aaPredicted RBP10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 BICD2Q8TD16 824 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 NSUN6Q8TEA1 469 aaKnown RBP10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 KAT2BQ92831 832 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 EPSTI1Q96J88 318 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 GBP4Q96PP9 640 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 RMDN3Q96TC7 470 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 UBE2OQ9C0C9 1292 aaKnown RBP10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 SCAND2PQ9GZW5 306 aaPredicted RBP10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 CSRNP2Q9H175 543 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 TMEM63CQ9P1W3 806 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 ATP6V1DQ9Y5K8 247 aa10.26□□□□□ -0.77
TM4SF1-203ENST00000493298 A0A0U1RQG5 324 aaPredicted RBP10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 A0A1W2PQ27 194 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 A0A1W2PQ64 194 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 A0A1W2PQD8 194 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 TRAK2O60296 914 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 B4GALT4O60513 344 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 NR1I2O75469 434 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 NR3C2P08235 984 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 NCLP19338 710 aaKnown RBP10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 EIF2AK2P19525 551 aaKnown RBP10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 NDUFA8P51970 172 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 ITGB3BPQ13352 177 aaPredicted RBP10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 STK38Q15208 465 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 GPR153Q6NV75 609 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 MOXD1Q6UVY6 613 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 SAMD3Q8N6K7 520 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 IGSF22Q8N9C0 903 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 SCFD2Q8WU76 684 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 EMID1Q96A84 441 aaPredicted RBP10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 GLT1D1Q96MS3 346 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 IWS1Q96ST2 819 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 MTRQ99707 1265 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 WNT8AQ9H1J5 351 aa10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 MAP3K20Q9NYL2 800 aaKnown RBP10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 DDX41Q9UJV9 622 aaKnown RBP10.25□□□□□ -0.77
TM4SF1-203ENST00000493298 VAV3Q9UKW4 847 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms