RNA–Protein interactions for RNA: ENST00000493085.5

GPM6B-209, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-209ENST00000493085 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.88□□□□□ -0.51
GPM6B-209ENST00000493085 KCNJ14Q9UNX9 436 aa11.88□□□□□ -0.51
GPM6B-209ENST00000493085 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
GPM6B-209ENST00000493085 TANC1Q9C0D5 1861 aa11.88□□□□□ -0.51
GPM6B-209ENST00000493085 C17orf102A2RUQ5 167 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 DDX39AO00148 427 aaKnown RBP11.87□□□□□ -0.51
GPM6B-209ENST00000493085 GNAT1P11488 350 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 MARK3P27448 753 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 USP11P51784 963 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 ACTR2P61160 394 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
GPM6B-209ENST00000493085 PTK7Q13308 1070 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 ITGB3BPQ13352 177 aaPredicted RBP11.87□□□□□ -0.51
GPM6B-209ENST00000493085 NPY5RQ15761 445 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 PRR16Q569H4 304 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 ZNF365Q70YC5 407 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
GPM6B-209ENST00000493085 TBCKQ8TEA7 893 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 AFAP1L1Q8TED9 768 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 GLG1Q92896 1179 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 ATP6V0A1Q93050 837 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 UIMC1Q96RL1 719 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 CTAGE1Q96RT6 745 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 ZNF577Q9BSK1 485 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 PHF20Q9BVI0 1012 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 SMARCAD1Q9H4L7 1026 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 ERAP1Q9NZ08 941 aa11.87□□□□□ -0.51
GPM6B-209ENST00000493085 EMSYQ7Z589 1322 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 M0R2N6 131 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 IPO5O00410 1097 aaKnown RBP11.86□□□□□ -0.51
GPM6B-209ENST00000493085 JAK2O60674 1132 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 LGR5O75473 907 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 SLC34A2O95436 690 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 FGBP02675 491 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 PFKMP08237 780 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 IQCF3P0C7M6 154 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
GPM6B-209ENST00000493085 RFC2P35250 354 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 HIC1Q14526 733 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 NONOQ15233 471 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPM6B-209ENST00000493085 RABEP1Q15276 862 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 C16orf59Q7L2K0 433 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 KRT25Q7Z3Z0 450 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 DEFB128Q7Z7B8 93 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 CCDC83Q8IWF9 413 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 DHX38Q92620 1227 aaKnown RBP11.86□□□□□ -0.51
GPM6B-209ENST00000493085 ZSCAN31Q96LW9 406 aaPredicted RBP11.86□□□□□ -0.51
GPM6B-209ENST00000493085 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
GPM6B-209ENST00000493085 RNPEPQ9H4A4 650 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 AZI2Q9H6S1 392 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 GJB4Q9NTQ9 266 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 SETD4Q9NVD3 440 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 TCEAL9Q9UHQ7 104 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 MYH9P35579 1960 aaKnown RBP11.86□□□□□ -0.51
GPM6B-209ENST00000493085 TET1Q8NFU7 2136 aa11.86□□□□□ -0.51
GPM6B-209ENST00000493085 LAMA3Q16787 3333 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 CCDC194A0A1B0GVG4 234 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 TREHO43280 583 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 EDIL3O43854 480 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 CKBP12277 381 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 SELPP16109 830 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 HOXC8P31273 242 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 RBL2Q08999 1139 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 ST3GAL1Q11201 340 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 PPFIA1Q13136 1202 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 GPR153Q6NV75 609 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 LRRC8DQ7L1W4 858 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 OTOP2Q7RTS6 562 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 SERINC5Q86VE9 423 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 HERVK_113Q902F9 699 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 LENG9Q96B70 501 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 PCYT2Q99447 389 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 BRMS1Q9HCU9 246 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 SH2B1Q9NRF2 756 aaPredicted RBP11.85□□□□□ -0.51
GPM6B-209ENST00000493085 TBC1D22BQ9NU19 505 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 NRCAMQ92823 1304 aa11.85□□□□□ -0.51
GPM6B-209ENST00000493085 BACH1O14867 736 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 DHX15O43143 795 aaKnown RBP11.84□□□□□ -0.51
GPM6B-209ENST00000493085 ST18O60284 1047 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 ATG7O95352 703 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 PARNO95453 639 aaKnown RBP11.84□□□□□ -0.51
GPM6B-209ENST00000493085 CCNE2O96020 404 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 KRT2P35908 639 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 STAT5BP51692 787 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 FOSBP53539 338 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 SMAD3P84022 425 aaKnown RBP11.84□□□□□ -0.51
GPM6B-209ENST00000493085 TRIM29Q14134 588 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 INF2Q27J81 1249 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 TRIM71Q2Q1W2 868 aaKnown RBP11.84□□□□□ -0.51
GPM6B-209ENST00000493085 FAM160B1Q5W0V3 765 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 ZNF746Q6NUN9 644 aaPredicted RBP11.84□□□□□ -0.51
GPM6B-209ENST00000493085 MIS18BP1Q6P0N0 1132 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 PLPPR4Q7Z2D5 763 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 OXER1Q8TDS5 423 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 LMBR1Q8WVP7 490 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 TNPO1Q92973 898 aaKnown RBP11.84□□□□□ -0.51
GPM6B-209ENST00000493085 WNT8BQ93098 351 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 FTOQ9C0B1 505 aaKnown RBP eCLIP11.84□□□□□ -0.51
GPM6B-209ENST00000493085 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
GPM6B-209ENST00000493085 WDR81Q562E7 1941 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms