RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
CSTF1-206ENST00000493039 SH3TC2Q8TF17 1288 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 CDHR1Q96JP9 859 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 MMTAG2Q9BU76 263 aaKnown RBP10.56□□□□□ -0.72
CSTF1-206ENST00000493039 UNC45AQ9H3U1 944 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 TBC1D22BQ9NU19 505 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 LMBRD1Q9NUN5 540 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 NFASCO94856 1347 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 DDX39AO00148 427 aaKnown RBP10.56□□□□□ -0.72
CSTF1-206ENST00000493039 GAS7O60861 476 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 GGPS1O95749 300 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 HMGCRP04035 888 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 ARHGAP1Q07960 439 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 PPP2R5CQ13362 524 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 PDIA5Q14554 519 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 HSDL1Q3SXM5 330 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 CELF3Q5SZQ8 465 aaKnown RBP10.56□□□□□ -0.72
CSTF1-206ENST00000493039 ADALQ6DHV7 355 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 FERMT2Q96AC1 680 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 NRBP1Q9UHY1 535 aa10.56□□□□□ -0.72
CSTF1-206ENST00000493039 KIAA1217Q5T5P2 1943 aa10.55□□□□□ -0.72
CSTF1-206ENST00000493039 CTAGE5O15320 804 aa10.55□□□□□ -0.72
CSTF1-206ENST00000493039 INHAP05111 366 aa10.55□□□□□ -0.72
CSTF1-206ENST00000493039 TNFAIP2Q03169 654 aa10.55□□□□□ -0.72
CSTF1-206ENST00000493039 ECM1Q16610 540 aa10.55□□□□□ -0.72
CSTF1-206ENST00000493039 KCNV1Q6PIU1 500 aa10.55□□□□□ -0.72
CSTF1-206ENST00000493039 CTU1Q7Z7A3 348 aaKnown RBP10.55□□□□□ -0.72
CSTF1-206ENST00000493039 SLAIN1Q8ND83 568 aa10.55□□□□□ -0.72
CSTF1-206ENST00000493039 LRRC15Q8TF66 581 aa10.55□□□□□ -0.72
CSTF1-206ENST00000493039 A0A087X0B3 334 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 GSTTP1A0A1W2PQM5 241 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 CUTAO60888 179 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 MCM4P33991 863 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 METTL7BQ6UX53 244 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
CSTF1-206ENST00000493039 GBP4Q96PP9 640 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 HSD17B14Q9BPX1 270 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 JPH1Q9HDC5 661 aaPredicted RBP10.54□□□□□ -0.72
CSTF1-206ENST00000493039 SEPT4O43236 478 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 CHMP2AO43633 222 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 MARCH6O60337 910 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 ATG7O95352 703 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 SPATA31C1P0DKV0 1188 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 LONP1P36776 959 aaKnown RBP10.54□□□□□ -0.72
CSTF1-206ENST00000493039 NEDD9Q14511 834 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 RESP18Q5W5W9 173 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 ABHD15Q6UXT9 468 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 SYMPKQ92797 1274 aaKnown RBP10.54□□□□□ -0.72
CSTF1-206ENST00000493039 EMID1Q96A84 441 aaPredicted RBP10.54□□□□□ -0.72
CSTF1-206ENST00000493039 TEKT3Q9BXF9 490 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 GOLPH3LQ9H4A5 285 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 RGL1Q9NZL6 768 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 WRAP73Q9P2S5 460 aaPredicted RBP10.54□□□□□ -0.72
CSTF1-206ENST00000493039 SLC9A2Q9UBY0 812 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 FAM184BQ9ULE4 1060 aa10.54□□□□□ -0.72
CSTF1-206ENST00000493039 CMA1P23946 247 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 ACTR2P61160 394 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 SP4Q02446 784 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 MAPK8IP2Q13387 824 aaPredicted RBP10.53□□□□□ -0.72
CSTF1-206ENST00000493039 MTFR1Q15390 333 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 ZNF746Q6NUN9 644 aaPredicted RBP10.53□□□□□ -0.72
CSTF1-206ENST00000493039 PCYT2Q99447 389 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 GPR20Q99678 358 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 SDF4Q9BRK5 362 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 PDCL3Q9H2J4 239 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 LRWD1Q9UFC0 647 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 IGKV6D-21A0A0A0MT36 114 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 FAM237AA0A1B0GTK4 181 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 A0A1B0GVL5 298 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 A0A1W2PQ27 194 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 A0A1W2PQ64 194 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 A0A1W2PQD8 194 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 DYNC1LI2O43237 492 aaPredicted RBP10.53□□□□□ -0.72
CSTF1-206ENST00000493039 MED24O75448 989 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 SLITRK3O94933 977 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 AKR1A1P14550 325 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 KRT76Q01546 638 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 LHX8Q68G74 356 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 NCAPH2Q6IBW4 605 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 CATSPER3Q86XQ3 398 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 PIAS4Q8N2W9 510 aaPredicted RBP10.53□□□□□ -0.72
CSTF1-206ENST00000493039 AFG1LQ8WV93 481 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 SPATA33Q96N06 139 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 PANK2Q9BZ23 570 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 MLXIPQ9HAP2 919 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 DISC1Q9NRI5 854 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 HPSEQ9Y251 543 aa10.53□□□□□ -0.72
CSTF1-206ENST00000493039 A0A087WWV3 80 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 MYADML2A6NDP7 307 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 A6NJR5 290 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 ZBTB39O15060 712 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 DUSP11O75319 330 aaKnown RBP10.52□□□□□ -0.73
CSTF1-206ENST00000493039 GH1P01241 217 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 HOXD8P13378 290 aaPredicted RBP10.52□□□□□ -0.73
CSTF1-206ENST00000493039 CNGA1P29973 690 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 SNW1Q13573 536 aaKnown RBP10.52□□□□□ -0.73
CSTF1-206ENST00000493039 LAMC2Q13753 1193 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms