RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 DOCK3Q8IZD9 2030 aa15.77■□□□□ 0.12
PDZRN3-210ENST00000492909 POTEB3A0JP26 581 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 ASB14A6NK59 587 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 ZNF500O60304 480 aaPredicted RBP15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 MED24O75448 989 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 SMC2O95347 1197 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 PRR29P0C7W0 189 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 ICAM3P32942 547 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 ECM1Q16610 540 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 POTEBQ6S5H4 581 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 SEPT14Q6ZU15 432 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 CATSPER3Q86XQ3 398 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 LARP4BQ92615 738 aaKnown RBP15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 STAMQ92783 540 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 SMARCE1Q969G3 411 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 MTRQ99707 1265 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 CFHR5Q9BXR6 569 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 KIAA1024Q9UPX6 916 aa15.77■□□□□ 0.11
PDZRN3-210ENST00000492909 SLC15A5A6NIM6 579 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 GPR25O00155 361 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 GTPBP6O43824 516 aaPredicted RBP15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 COBLO75128 1261 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 OFD1O75665 1012 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 MYL1P05976 194 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 SPATA31C1P0DKV0 1188 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 KCNA2P16389 499 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 KRT76Q01546 638 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 EPHA7Q15375 998 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 STX1AQ16623 288 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 NT5DC1Q5TFE4 455 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 MIER3Q7Z3K6 550 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 DPP9Q86TI2 863 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 MORC4Q8TE76 937 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 HSD17B14Q9BPX1 270 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 TUFT1Q9NNX1 390 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 BLOC1S4Q9NUP1 217 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 ZKSCAN5Q9Y2L8 839 aa15.76■□□□□ 0.11
PDZRN3-210ENST00000492909 BIN1O00499 593 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 NFASCO94856 1347 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 CTCFP49711 727 aaPredicted RBP15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 AMPD3Q01432 767 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 CAP1Q01518 475 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 CYP4A11Q02928 519 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 DPYDQ12882 1025 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 WDR81Q562E7 1941 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 SV2BQ7L1I2 683 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 ZNF467Q7Z7K2 595 aaPredicted RBP15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 KCTD17Q8N5Z5 321 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 SPATA20Q8TB22 786 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 ZNF296Q8WUU4 475 aaPredicted RBP15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 RAD54LQ92698 747 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 ANO10Q9NW15 660 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 SAMM50Q9Y512 469 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 LOXHD1Q8IVV2 1947 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 MGAMO43451 1857 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 POTEFA5A3E0 1075 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 TGFB3P10600 412 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 MUTP22033 750 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 CASP1P29466 404 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 SFNP31947 248 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 SARSP49591 514 aaKnown RBP15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 ZNF746Q6NUN9 644 aaPredicted RBP15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 POTEGQ6S5H5 508 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 EEPD1Q7L9B9 569 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 KCNK18Q7Z418 384 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 NEK9Q8TD19 979 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 GSDMAQ96QA5 445 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 SENP7Q9BQF6 1050 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 SLC5A4Q9NY91 659 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 RGL1Q9NZL6 768 aa15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 DIS3Q9Y2L1 958 aaKnown RBP15.75■□□□□ 0.11
PDZRN3-210ENST00000492909 WDR64B1ANS9 1081 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 SLITRK3O94933 977 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 JAK3P52333 1124 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 CUL4BQ13620 913 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 MCM6Q14566 821 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 ANO6Q4KMQ2 910 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 KCNV1Q6PIU1 500 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 ARMCX2Q7L311 632 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 TRIML1Q8N9V2 468 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 DYDC2Q96IM9 177 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 ARHGAP39Q9C0H5 1083 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 BLZF1Q9H2G9 400 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 JPH1Q9HDC5 661 aaPredicted RBP15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 DNM3Q9UQ16 869 aa15.74■□□□□ 0.11
PDZRN3-210ENST00000492909 CASP8AP2Q9UKL3 1982 aa15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 ZSWIM8A7E2V4 1837 aa15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 E9PMD0 336 aa15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 CAVIN2O95810 425 aa15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 NLRP12P59046 1061 aa15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 CTTNQ14247 550 aaKnown RBP15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 DHX8Q14562 1220 aaKnown RBP15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 MORN1Q5T089 497 aa15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 TPH2Q8IWU9 490 aa15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 GIMAP8Q8ND71 665 aaPredicted RBP15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 RDM1Q8NG50 284 aa15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 SLC9A2Q9UBY0 812 aa15.73■□□□□ 0.11
PDZRN3-210ENST00000492909 A0A087WWV3 80 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms