RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 GPKOWQ92917 476 aaPredicted RBP eCLIP14.04□□□□□ -0.16
GPNMB-214ENST00000492858 MRPL42Q9Y6G3 142 aaKnown RBP14.04□□□□□ -0.16
GPNMB-214ENST00000492858 DMXL1Q9Y485 3027 aa14.04□□□□□ -0.16
GPNMB-214ENST00000492858 PLXNA3P51805 1871 aa14.04□□□□□ -0.16
GPNMB-214ENST00000492858 NOP56O00567 594 aaKnown RBP14.03□□□□□ -0.16
GPNMB-214ENST00000492858 ENPP3O14638 875 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 DGKIO75912 1065 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 CHRNA1P02708 482 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 TGFB3P10600 412 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 HSD17B4P51659 736 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 NUBP1P53384 320 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 ARHGAP4P98171 946 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 ZBTB33Q86T24 672 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 VSIG10LQ86VR7 867 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 KLHL23Q8NBE8 558 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 IL31RAQ8NI17 732 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 POF1BQ8WVV4 589 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 ZFP91Q96JP5 570 aaPredicted RBP14.03□□□□□ -0.16
GPNMB-214ENST00000492858 ZKSCAN3Q9BRR0 538 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 BCAS3Q9H6U6 928 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 DCTPP1Q9H773 170 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 SUPT16HQ9Y5B9 1047 aaKnown RBP14.03□□□□□ -0.16
GPNMB-214ENST00000492858 PCDHGC5Q9Y5F6 944 aa14.03□□□□□ -0.16
GPNMB-214ENST00000492858 MYH7BA7E2Y1 1941 aa14.02□□□□□ -0.16
GPNMB-214ENST00000492858 OPLAHO14841 1288 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 ATF7P17544 494 aaPredicted RBP14.02□□□□□ -0.17
GPNMB-214ENST00000492858 NBL1P41271 181 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 ID4P47928 161 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 LPIN1Q14693 890 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 PGM5Q15124 567 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 NAALADL2Q58DX5 795 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 STOX1Q6ZVD7 989 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 TRIM50Q86XT4 487 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 PNMA1Q8ND90 353 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 OTUD7AQ8TE49 926 aaPredicted RBP14.02□□□□□ -0.17
GPNMB-214ENST00000492858 LMBR1Q8WVP7 490 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 SUSD6Q92537 303 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 RIPOR3Q96MK2 946 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 USP26Q9BXU7 913 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 TLE6Q9H808 572 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 EHMT1Q9H9B1 1298 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 VAT1LQ9HCJ6 419 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 FAM186AA6NE01 2351 aa14.02□□□□□ -0.17
GPNMB-214ENST00000492858 PER2O15055 1255 aa14.01□□□□□ -0.17
GPNMB-214ENST00000492858 CCND2P30279 289 aa14.01□□□□□ -0.17
GPNMB-214ENST00000492858 HOXA13P31271 388 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-214ENST00000492858 ADAM17P78536 824 aa14.01□□□□□ -0.17
GPNMB-214ENST00000492858 RBM10P98175 930 aaKnown RBP14.01□□□□□ -0.17
GPNMB-214ENST00000492858 PAN2Q504Q3 1202 aaKnown RBP14.01□□□□□ -0.17
GPNMB-214ENST00000492858 MFSD6Q6ZSS7 791 aa14.01□□□□□ -0.17
GPNMB-214ENST00000492858 CMTR2Q8IYT2 770 aaKnown RBP14.01□□□□□ -0.17
GPNMB-214ENST00000492858 JMJD4Q9H9V9 463 aa14.01□□□□□ -0.17
GPNMB-214ENST00000492858 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-214ENST00000492858 DNAH14Q0VDD8 3507 aa14.01□□□□□ -0.17
GPNMB-214ENST00000492858 FRYLO94915 3013 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 PPFIA3O75145 1194 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 SP100P23497 879 aaPredicted RBP14□□□□□ -0.17
GPNMB-214ENST00000492858 GHRHRQ02643 423 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 MGAT3Q09327 533 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 ASPRV1Q53RT3 343 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 UTP14CQ5TAP6 766 aaKnown RBP14□□□□□ -0.17
GPNMB-214ENST00000492858 RUFY4Q6ZNE9 571 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 CYFIP1Q7L576 1253 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 DGKHQ86XP1 1220 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 TBC1D10CQ8IV04 446 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 VN1R2Q8NFZ6 395 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 MICAL1Q8TDZ2 1067 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 LINC01599Q8WXQ3 324 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 AMNQ9BXJ7 453 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 KAT14Q9H8E8 782 aa14□□□□□ -0.17
GPNMB-214ENST00000492858 NRCAMQ92823 1304 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 PCP11498 1178 aaKnown RBP13.99□□□□□ -0.17
GPNMB-214ENST00000492858 FBXO47Q5MNV8 452 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 METTL7BQ6UX53 244 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 TSHZ1Q6ZSZ6 1077 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 FRMD5Q7Z6J6 570 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 NPAS4Q8IUM7 802 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 ATP8B4Q8TF62 1192 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 ESR2Q92731 530 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 NEK1Q96PY6 1258 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 GPR20Q99678 358 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 HELLSQ9NRZ9 838 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 GVINP1Q7Z2Y8 2422 aa13.99□□□□□ -0.17
GPNMB-214ENST00000492858 ZMYM6O95789 1325 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 NEDD4P46934 1319 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 PARP1P09874 1014 aaKnown RBP13.98□□□□□ -0.17
GPNMB-214ENST00000492858 MX1P20591 662 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 SP4Q02446 784 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 NEDD9Q14511 834 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 C20orf194Q5TEA3 1177 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 DIEXFQ68CQ4 756 aaKnown RBP13.98□□□□□ -0.17
GPNMB-214ENST00000492858 TAF2Q6P1X5 1199 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 RSPH3Q86UC2 560 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 ADSSL1Q8N142 457 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 TMEM105Q8N8V8 129 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 KREMEN2Q8NCW0 462 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 NKD2Q969F2 451 aaPredicted RBP13.98□□□□□ -0.17
GPNMB-214ENST00000492858 FAM227BQ96M60 508 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 RNF41Q9H4P4 317 aaPredicted RBP13.98□□□□□ -0.17
GPNMB-214ENST00000492858 MAP3K20Q9NYL2 800 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms