RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 LRCH3Q96II8 777 aa8.19□□□□□ -1.1
PDLIM1-204ENST00000492511 TBC1D32Q96NH3 1257 aa8.19□□□□□ -1.1
PDLIM1-204ENST00000492511 HIPK3Q9H422 1215 aa8.19□□□□□ -1.1
PDLIM1-204ENST00000492511 RNPEPQ9H4A4 650 aa8.19□□□□□ -1.1
PDLIM1-204ENST00000492511 TUT1Q9H6E5 874 aaKnown RBP8.19□□□□□ -1.1
PDLIM1-204ENST00000492511 STXBP5LQ9Y2K9 1186 aa8.19□□□□□ -1.1
PDLIM1-204ENST00000492511 NFASCO94856 1347 aa8.19□□□□□ -1.1
PDLIM1-204ENST00000492511 COL6A3P12111 3177 aa8.19□□□□□ -1.1
PDLIM1-204ENST00000492511 SCN10AQ9Y5Y9 1956 aa8.19□□□□□ -1.1
PDLIM1-204ENST00000492511 LTBP2Q14767 1821 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 CYP3A7-CYP3A51PA0A087WV96 503 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 NOP56O00567 594 aaKnown RBP8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 LGR5O75473 907 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 SMIM10L2AP0DMW4 78 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 SMIM10L2BP0DMW5 78 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 ACRP10323 421 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 CYP3A7P24462 503 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 TCF7P36402 384 aaPredicted RBP8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 ZNF76P36508 570 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 USP11P51784 963 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 ACTR2P61160 394 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 ADAM17P78536 824 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 FPGSQ05932 587 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 PTGISQ16647 500 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 TMEM240Q5SV17 173 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 GALNT17Q6IS24 598 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 TRAF7Q6Q0C0 670 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 CCDC83Q8IWF9 413 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 C7orf31Q8N865 590 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 TNFRSF25Q93038 417 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 GJA10Q969M2 543 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 SCLYQ96I15 445 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 MBOAT7Q96N66 472 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 KATNAL1Q9BW62 490 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 BACH2Q9BYV9 841 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 JPH1Q9HDC5 661 aaPredicted RBP8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 SLC9A2Q9UBY0 812 aa8.18□□□□□ -1.1
PDLIM1-204ENST00000492511 IGKV6D-21A0A0A0MT36 114 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 FAM205CA6NFA0 338 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 IPO5O00410 1097 aaKnown RBP8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 MSH4O15457 936 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 TREHO43280 583 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 TDP2O95551 362 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 IQCF3P0C7M6 154 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 RBL2Q08999 1139 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 NR5A1Q13285 461 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 RABEP1Q15276 862 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 Q4G0T1 1027 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 PRR16Q569H4 304 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 RASIP1Q5U651 963 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 ABHD15Q6UXT9 468 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 TMEM199Q8N511 208 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 ZSCAN31Q96LW9 406 aaPredicted RBP8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 SDF4Q9BRK5 362 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 ZNF577Q9BSK1 485 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 IL23AQ9NPF7 189 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 SETD4Q9NVD3 440 aa8.17□□□□□ -1.1
PDLIM1-204ENST00000492511 C17orf102A2RUQ5 167 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 DDX39AO00148 427 aaKnown RBP8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 PITPNM1O00562 1244 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 WNT7AO00755 349 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 CKBP12277 381 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 ATP4AP20648 1035 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 MARK3P27448 753 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 FOSBP53539 338 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 SETQ01105 290 aaPredicted RBP8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 PTK7Q13308 1070 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 PPIGQ13427 754 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 MBTPS1Q14703 1052 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 PLCB4Q15147 1175 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 NONOQ15233 471 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 INF2Q27J81 1249 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 TCTN1Q2MV58 587 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 MARCH8Q5T0T0 291 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 KRT40Q6A162 431 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 B3GNT9Q6UX72 402 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 PIK3AP1Q6ZUJ8 805 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 ZNF365Q70YC5 407 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 PLPPR4Q7Z2D5 763 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 KRT25Q7Z3Z0 450 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 EMSYQ7Z589 1322 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 SERINC5Q86VE9 423 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 ETNPPLQ8TBG4 499 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 WASF1Q92558 559 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 SLC5A5Q92911 643 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 ZBTB10Q96DT7 871 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 LLPHQ9BRT6 129 aaKnown RBP8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 OSBPL7Q9BZF2 842 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 SMARCAD1Q9H4L7 1026 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 SH2B1Q9NRF2 756 aaPredicted RBP8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 TBC1D22BQ9NU19 505 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 CXXC1Q9P0U4 656 aaPredicted RBP8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 CDH23Q9H251 3354 aa8.16□□□□□ -1.1
PDLIM1-204ENST00000492511 BTBD18B2RXH4 712 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 SLC37A4O43826 429 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 NBNO60934 754 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 PSMD10O75832 226 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 FGBP02675 491 aa8.15□□□□□ -1.1
PDLIM1-204ENST00000492511 MMP1P03956 469 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms