RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 ZNF618Q5T7W0 954 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 KRT40Q6A162 431 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 USP17L6PQ6QN14 398 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 CCDC12Q8WUD4 166 aaPredicted RBP16.8■□□□□ 0.28
SS18L1-205ENST00000492466 PHKBQ93100 1093 aa16.8■□□□□ 0.28
SS18L1-205ENST00000492466 SLKQ9H2G2 1235 aaPredicted RBP16.8■□□□□ 0.28
SS18L1-205ENST00000492466 TNFRSF10AO00220 468 aa16.79■□□□□ 0.28
SS18L1-205ENST00000492466 CDKL5O76039 1030 aa16.79■□□□□ 0.28
SS18L1-205ENST00000492466 SCG2P13521 617 aa16.79■□□□□ 0.28
SS18L1-205ENST00000492466 ICAM3P32942 547 aa16.79■□□□□ 0.28
SS18L1-205ENST00000492466 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
SS18L1-205ENST00000492466 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
SS18L1-205ENST00000492466 UBE2SQ16763 222 aa16.79■□□□□ 0.28
SS18L1-205ENST00000492466 CNKSR3Q6P9H4 555 aa16.79■□□□□ 0.28
SS18L1-205ENST00000492466 SERINC5Q86VE9 423 aa16.79■□□□□ 0.28
SS18L1-205ENST00000492466 ZNF274Q96GC6 653 aaPredicted RBP16.79■□□□□ 0.28
SS18L1-205ENST00000492466 INPP4AQ96PE3 977 aaPredicted RBP16.79■□□□□ 0.28
SS18L1-205ENST00000492466 FAM217BQ9NTX9 383 aaPredicted RBP16.79■□□□□ 0.28
SS18L1-205ENST00000492466 TELO2Q9Y4R8 837 aa16.79■□□□□ 0.28
SS18L1-205ENST00000492466 DOCK5Q9H7D0 1870 aa16.78■□□□□ 0.28
SS18L1-205ENST00000492466 KIF28PB7ZC32 967 aa16.78■□□□□ 0.28
SS18L1-205ENST00000492466 BMP1P13497 986 aa16.78■□□□□ 0.28
SS18L1-205ENST00000492466 AK2P54819 239 aa16.78■□□□□ 0.28
SS18L1-205ENST00000492466 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
SS18L1-205ENST00000492466 ADAMTS19Q8TE59 1207 aa16.78■□□□□ 0.28
SS18L1-205ENST00000492466 ARNTL2Q8WYA1 636 aa16.78■□□□□ 0.28
SS18L1-205ENST00000492466 RNF26Q9BY78 433 aaPredicted RBP16.78■□□□□ 0.28
SS18L1-205ENST00000492466 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
SS18L1-205ENST00000492466 ABHD14A-ACY1A0A1B0GW23 586 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 SPATA31C2B4DYI2 1134 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 H3BRB1 525 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 STXBP3O00186 592 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 MEIS2O14770 477 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 TLL1O43897 1013 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 GJB5O95377 273 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 KCNJ6P48051 423 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 TFF2Q03403 129 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 FUT2Q10981 343 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
SS18L1-205ENST00000492466 GNPTABQ3T906 1256 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 MICALL1Q8N3F8 863 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 OSBPL7Q9BZF2 842 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 GLT8D2Q9H1C3 349 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 TUT1Q9H6E5 874 aaKnown RBP16.77■□□□□ 0.28
SS18L1-205ENST00000492466 MLXIPQ9HAP2 919 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 BARHL2Q9NY43 387 aa16.77■□□□□ 0.28
SS18L1-205ENST00000492466 SMCO2A6NFE2 343 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 PIK3CDO00329 1044 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 PRPF3O43395 683 aaKnown RBP16.76■□□□□ 0.27
SS18L1-205ENST00000492466 LGALS2P05162 132 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 IFNAR1P17181 557 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 EVCP57679 992 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 GRB10Q13322 594 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 METTL7BQ6UX53 244 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 RNPEPQ9H4A4 650 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 C6orf50Q9HD87 102 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 RTEL1Q9NZ71 1219 aa16.76■□□□□ 0.27
SS18L1-205ENST00000492466 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
SS18L1-205ENST00000492466 TREHO43280 583 aa16.75■□□□□ 0.27
SS18L1-205ENST00000492466 STAM2O75886 525 aa16.75■□□□□ 0.27
SS18L1-205ENST00000492466 ADAM17P78536 824 aa16.75■□□□□ 0.27
SS18L1-205ENST00000492466 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.75■□□□□ 0.27
SS18L1-205ENST00000492466 CYFIP1Q7L576 1253 aa16.75■□□□□ 0.27
SS18L1-205ENST00000492466 RAD9AQ99638 391 aa16.75■□□□□ 0.27
SS18L1-205ENST00000492466 GPR20Q99678 358 aa16.75■□□□□ 0.27
SS18L1-205ENST00000492466 RIC8AQ9NPQ8 531 aa16.75■□□□□ 0.27
SS18L1-205ENST00000492466 BRWD1Q9NSI6 2320 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 FIBPO43427 364 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 GTPBP6O43824 516 aaPredicted RBP16.74■□□□□ 0.27
SS18L1-205ENST00000492466 LGR5O75473 907 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 SMIM10L2AP0DMW4 78 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 SMIM10L2BP0DMW5 78 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 KCNQ1P51787 676 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 IKBKEQ14164 716 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 PLEKHG4Q58EX7 1191 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 PCNX4Q63HM2 1172 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 DBF4BQ8NFT6 615 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 BICD2Q8TD16 824 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 UHRF1Q96T88 793 aaPredicted RBP16.74■□□□□ 0.27
SS18L1-205ENST00000492466 TPCN1Q9ULQ1 816 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 PCDHA6Q9UN73 950 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 PCDHA8Q9Y5H6 950 aa16.74■□□□□ 0.27
SS18L1-205ENST00000492466 COL4A4P53420 1690 aaPredicted RBP16.73■□□□□ 0.27
SS18L1-205ENST00000492466 C17orf102A2RUQ5 167 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 RSPH10B2B2RC85 870 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 EFCAB14O75071 495 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 DEXIO95424 95 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 RSPH10BP0C881 870 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 GNA11P29992 359 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 THPOP40225 353 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 NLRP5P59047 1200 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 ERVK-21P61565 698 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 SCRN1Q12765 414 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 AP3B2Q13367 1082 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 NEDD9Q14511 834 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 TYW1BQ6NUM6 668 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 NLRX1Q86UT6 975 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 TRIM50Q86XT4 487 aa16.73■□□□□ 0.27
SS18L1-205ENST00000492466 REXO1Q8N1G1 1221 aaKnown RBP16.73■□□□□ 0.27
SS18L1-205ENST00000492466 ATP6V0A1Q93050 837 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms