RNA–Protein interactions for RNA: ENST00000492244.5

FDPS-217, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-217ENST00000492244 SETD4Q9NVD3 440 aa13.56□□□□□ -0.24
FDPS-217ENST00000492244 PRKAG3Q9UGI9 489 aa13.56□□□□□ -0.24
FDPS-217ENST00000492244 MUC6Q6W4X9 2439 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 PRR33A8MZF0 331 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 E7EWF7 191 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 RB1P06400 928 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 CYP21A2P08686 494 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 CALM1P0DP23 149 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 CALM2P0DP24 149 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 CALM3P0DP25 149 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 CTNNB1P35222 781 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 MRPS9P82933 396 aaKnown RBP13.55□□□□□ -0.24
FDPS-217ENST00000492244 HIC1Q14526 733 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 FAM26DQ5JW98 314 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 UTP14CQ5TAP6 766 aaKnown RBP13.55□□□□□ -0.24
FDPS-217ENST00000492244 TMTC2Q8N394 836 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 LMBR1Q8WVP7 490 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
FDPS-217ENST00000492244 PABPC5Q96DU9 382 aaKnown RBP13.55□□□□□ -0.24
FDPS-217ENST00000492244 POP1Q99575 1024 aaKnown RBP13.55□□□□□ -0.24
FDPS-217ENST00000492244 ERAP1Q9NZ08 941 aa13.55□□□□□ -0.24
FDPS-217ENST00000492244 GRXCR2A6NFK2 248 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 SPDYE3A6NKU9 549 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 M0QZ92 97 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 MAFGO15525 162 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 CYTH3O43739 400 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 TCF7P36402 384 aaPredicted RBP13.54□□□□□ -0.24
FDPS-217ENST00000492244 SP4Q02446 784 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 PPFIA1Q13136 1202 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 NFXL1Q6ZNB6 911 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 FAM43BQ6ZT52 329 aaPredicted RBP13.54□□□□□ -0.24
FDPS-217ENST00000492244 EP400NLQ6ZTU2 488 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 TEX2Q8IWB9 1127 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 ZNF654Q8IZM8 581 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 NEK9Q8TD19 979 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 UPF3BQ9BZI7 483 aaKnown RBP13.54□□□□□ -0.24
FDPS-217ENST00000492244 RTEL1Q9NZ71 1219 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 ADGRA3Q8IWK6 1321 aa13.54□□□□□ -0.24
FDPS-217ENST00000492244 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
FDPS-217ENST00000492244 C5orf67F2Z3F1 127 aa13.53□□□□□ -0.24
FDPS-217ENST00000492244 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
FDPS-217ENST00000492244 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.53□□□□□ -0.24
FDPS-217ENST00000492244 PIBF1Q8WXW3 757 aa13.53□□□□□ -0.24
FDPS-217ENST00000492244 GLG1Q92896 1179 aa13.53□□□□□ -0.24
FDPS-217ENST00000492244 ZFP91Q96JP5 570 aaPredicted RBP13.53□□□□□ -0.24
FDPS-217ENST00000492244 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
FDPS-217ENST00000492244 FTHL17Q9BXU8 183 aa13.53□□□□□ -0.24
FDPS-217ENST00000492244 DOCK5Q9H7D0 1870 aa13.53□□□□□ -0.24
FDPS-217ENST00000492244 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.25
FDPS-217ENST00000492244 RRN3P2A6NIE6 340 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 DCXO43602 365 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 GHRP10912 638 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.25
FDPS-217ENST00000492244 CHMLP26374 656 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 MCM5P33992 734 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 ADAM17P78536 824 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 SEMA3FQ13275 785 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 MTMR1Q13613 665 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 SLC35G1Q2M3R5 365 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 TCEAL5Q5H9L2 206 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 USP17L6PQ6QN14 398 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 TSHZ1Q6ZSZ6 1077 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 EXOC6Q8TAG9 804 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 SEPT1Q8WYJ6 367 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 TMEM87BQ96K49 555 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 IL25Q9H293 177 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 SMARCAD1Q9H4L7 1026 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 AZI2Q9H6S1 392 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 PSTPIP2Q9H939 334 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
FDPS-217ENST00000492244 CLDND1Q9NY35 253 aa13.52□□□□□ -0.25
FDPS-217ENST00000492244 FAM86C2PA6NEL3 165 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
FDPS-217ENST00000492244 MEIS2O14770 477 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 SGSM2O43147 1006 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 IL9P15248 144 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 BMPR1AP36894 532 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 BTG3Q14201 252 aaPredicted RBP13.51□□□□□ -0.25
FDPS-217ENST00000492244 COL19A1Q14993 1142 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 GRIK4Q16099 956 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 IER5Q5VY09 327 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 MB21D2Q8IYB1 491 aaPredicted RBP13.51□□□□□ -0.25
FDPS-217ENST00000492244 IGDCC4Q8TDY8 1250 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 KCNH6Q9H252 994 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 SQORQ9Y6N5 450 aa13.51□□□□□ -0.25
FDPS-217ENST00000492244 FSD2A1L4K1 749 aa13.5□□□□□ -0.25
FDPS-217ENST00000492244 PRC1O43663 620 aa13.5□□□□□ -0.25
FDPS-217ENST00000492244 STAG3L1P0CL83 205 aa13.5□□□□□ -0.25
FDPS-217ENST00000492244 PTH1RQ03431 593 aa13.5□□□□□ -0.25
FDPS-217ENST00000492244 NAALADL2Q58DX5 795 aa13.5□□□□□ -0.25
FDPS-217ENST00000492244 ADHFE1Q8IWW8 467 aa13.5□□□□□ -0.25
FDPS-217ENST00000492244 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
FDPS-217ENST00000492244 CLP1Q92989 425 aaKnown RBP13.5□□□□□ -0.25
FDPS-217ENST00000492244 UIMC1Q96RL1 719 aa13.5□□□□□ -0.25
FDPS-217ENST00000492244 JPH1Q9HDC5 661 aaPredicted RBP13.5□□□□□ -0.25
FDPS-217ENST00000492244 C11orf16Q9NQ32 467 aa13.5□□□□□ -0.25
FDPS-217ENST00000492244 SLC12A7Q9Y666 1083 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms