RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 INPP4AQ96PE3 977 aaPredicted RBP15.35■□□□□ 0.05
USF1-206ENST00000491629 PIGSQ96S52 555 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 RIOX1Q9H6W3 641 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 EHMT1Q9H9B1 1298 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 MUTYHQ9UIF7 546 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 SPATA31C2B4DYI2 1134 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 CTNNB1P35222 781 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 NT5C2P49902 561 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 MFAP1P55081 439 aaKnown RBP15.34■□□□□ 0.05
USF1-206ENST00000491629 IFIT1BQ5T764 474 aaKnown RBP15.34■□□□□ 0.05
USF1-206ENST00000491629 HOMER1Q86YM7 354 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 FIBCD1Q8N539 461 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 SAMD3Q8N6K7 520 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 CLP1Q92989 425 aaKnown RBP15.34■□□□□ 0.05
USF1-206ENST00000491629 ZNF689Q96CS4 500 aaPredicted RBP15.34■□□□□ 0.05
USF1-206ENST00000491629 IL17RAQ96F46 866 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 DSCC1Q9BVC3 393 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 USP26Q9BXU7 913 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
USF1-206ENST00000491629 SPTBN4Q9H254 2564 aa15.34■□□□□ 0.05
USF1-206ENST00000491629 EVPLQ92817 2033 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 GCOM1H8Y6P7 765 aaPredicted RBP15.33■□□□□ 0.04
USF1-206ENST00000491629 POLR2MP0CAP2 368 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 DNAJB1P25685 340 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 RRP1P56182 461 aaKnown RBP15.33■□□□□ 0.04
USF1-206ENST00000491629 MGAT3Q09327 533 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 LPIN1Q14693 890 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 HERC4Q5GLZ8 1057 aaPredicted RBP15.33■□□□□ 0.04
USF1-206ENST00000491629 METTL7BQ6UX53 244 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 LINC01599Q8WXQ3 324 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 APBB2Q92870 758 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 KCNH6Q9H252 994 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 OSBPL3Q9H4L5 887 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 RTEL1Q9NZ71 1219 aa15.33■□□□□ 0.04
USF1-206ENST00000491629 ENPP3O14638 875 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 RB1P06400 928 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 GHRP10912 638 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 ARHGAP4P98171 946 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 GRM4Q14833 912 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 RNF135Q8IUD6 432 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 CRIPAKQ8N1N5 446 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 UBAC1Q9BSL1 405 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 KRT23Q9C075 422 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 ZFHX2Q9C0A1 2572 aaPredicted RBP15.32■□□□□ 0.04
USF1-206ENST00000491629 ADGRA3Q8IWK6 1321 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 MYO10Q9HD67 2058 aa15.32■□□□□ 0.04
USF1-206ENST00000491629 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
USF1-206ENST00000491629 CSPG5O95196 566 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 ADAM15Q13444 863 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 IMMTQ16891 758 aaKnown RBP15.31■□□□□ 0.04
USF1-206ENST00000491629 UTP14CQ5TAP6 766 aaKnown RBP15.31■□□□□ 0.04
USF1-206ENST00000491629 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 ADGRD2Q7Z7M1 963 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 RTN4RL1Q86UN2 441 aaPredicted RBP15.31■□□□□ 0.04
USF1-206ENST00000491629 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 PRSS33Q8NF86 280 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 MSLNLQ96KJ4 702 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 C11orf84Q9BUA3 381 aaPredicted RBP15.31■□□□□ 0.04
USF1-206ENST00000491629 LMAN2LQ9H0V9 348 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 IGFLR1Q9H665 355 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 ALG13Q9NP73 1137 aaKnown RBP15.31■□□□□ 0.04
USF1-206ENST00000491629 FAM50BQ9Y247 325 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 TAF6LQ9Y6J9 622 aa15.31■□□□□ 0.04
USF1-206ENST00000491629 PNMA6FA0A0J9YX94 578 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 NCK2O43639 380 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 DGKIO75912 1065 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 MMP1P03956 469 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 SP4Q02446 784 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 TROAPQ12815 778 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 SMAD4Q13485 552 aaKnown RBP15.3■□□□□ 0.04
USF1-206ENST00000491629 NEDD9Q14511 834 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 FBXO47Q5MNV8 452 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 MARCH8Q5T0T0 291 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 IER5LQ5T953 404 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 ZBTB10Q96DT7 871 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 CNNM2Q9H8M5 875 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 AGO3Q9H9G7 860 aaKnown RBP15.3■□□□□ 0.04
USF1-206ENST00000491629 CLEC1BQ9P126 229 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 PLAGL2Q9UPG8 496 aa15.3■□□□□ 0.04
USF1-206ENST00000491629 PLXNA3P51805 1871 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 NRCAMQ92823 1304 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 FIBPO43427 364 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 ATP9AO75110 1047 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 EYA4O95677 639 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 GNAT1P11488 350 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 GNPTABQ3T906 1256 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 USP17L6PQ6QN14 398 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 EDAQ92838 391 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 UPF3BQ9BZI7 483 aaKnown RBP15.29■□□□□ 0.04
USF1-206ENST00000491629 DIAPH3Q9NSV4 1193 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 CD207Q9UJ71 328 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 MRPL42Q9Y6G3 142 aaKnown RBP15.29■□□□□ 0.04
USF1-206ENST00000491629 VPS13AQ96RL7 3174 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 WDR81Q562E7 1941 aa15.29■□□□□ 0.04
USF1-206ENST00000491629 GSTTP1A0A1W2PQM5 241 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 MBLAC1A4D2B0 266 aaPredicted RBP15.28■□□□□ 0.04
USF1-206ENST00000491629 STXBP3O00186 592 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 MEIS2O14770 477 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 STAM2O75886 525 aa15.28■□□□□ 0.04
USF1-206ENST00000491629 GLP2RO95838 553 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms