RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 EMSYQ7Z589 1322 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 KAT6AQ92794 2004 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 GSTTP1A0A1W2PQM5 241 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 IPO5O00410 1097 aaKnown RBP18.2■□□□□ 0.5
PFDN6-207ENST00000491382 PFKMP08237 780 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 SMIM10L2AP0DMW4 78 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 SMIM10L2BP0DMW5 78 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 RFC2P35250 354 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 PTK7Q13308 1070 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 ITGB3BPQ13352 177 aaPredicted RBP18.2■□□□□ 0.5
PFDN6-207ENST00000491382 RABEP1Q15276 862 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 PRR16Q569H4 304 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 KRT25Q7Z3Z0 450 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 TBCKQ8TEA7 893 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 AFAP1L1Q8TED9 768 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 ZSCAN31Q96LW9 406 aaPredicted RBP18.2■□□□□ 0.5
PFDN6-207ENST00000491382 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.2■□□□□ 0.51e-7■□□□□ 9.6
PFDN6-207ENST00000491382 MTIF3Q9H2K0 278 aaKnown RBP18.2■□□□□ 0.5
PFDN6-207ENST00000491382 AZI2Q9H6S1 392 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 BRMS1Q9HCU9 246 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 TBC1D22BQ9NU19 505 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 KCNJ14Q9UNX9 436 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 TELO2Q9Y4R8 837 aa18.2■□□□□ 0.5
PFDN6-207ENST00000491382 TRIP12Q14669 1992 aaPredicted RBP18.19■□□□□ 0.5
PFDN6-207ENST00000491382 M0R2N6 131 aa18.19■□□□□ 0.5
PFDN6-207ENST00000491382 SOX1O00570 391 aaPredicted RBP18.19■□□□□ 0.5
PFDN6-207ENST00000491382 ACTR2P61160 394 aa18.19■□□□□ 0.5
PFDN6-207ENST00000491382 NONOQ15233 471 aaKnown RBP eCLIP18.19■□□□□ 0.5
PFDN6-207ENST00000491382 NPY5RQ15761 445 aa18.19■□□□□ 0.5
PFDN6-207ENST00000491382 NSUN7Q8NE18 718 aaKnown RBP18.19■□□□□ 0.5
PFDN6-207ENST00000491382 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
PFDN6-207ENST00000491382 ATP6V0A1Q93050 837 aa18.19■□□□□ 0.5
PFDN6-207ENST00000491382 SCLYQ96I15 445 aa18.19■□□□□ 0.5
PFDN6-207ENST00000491382 CTAGE1Q96RT6 745 aa18.19■□□□□ 0.5
PFDN6-207ENST00000491382 SH2B1Q9NRF2 756 aaPredicted RBP18.19■□□□□ 0.5
PFDN6-207ENST00000491382 CCDC194A0A1B0GVG4 234 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 DDX39AO00148 427 aaKnown RBP18.18■□□□□ 0.5
PFDN6-207ENST00000491382 ST18O60284 1047 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 PARNO95453 639 aaKnown RBP18.18■□□□□ 0.5
PFDN6-207ENST00000491382 FGBP02675 491 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 ACRP10323 421 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 FDPSP14324 419 aaKnown RBP18.18■□□□□ 0.5
PFDN6-207ENST00000491382 HOXC8P31273 242 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 RBL2Q08999 1139 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 TRIM29Q14134 588 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 TMEM240Q5SV17 173 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 GPR153Q6NV75 609 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 LRCH3Q96II8 777 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 RNPEPQ9H4A4 650 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 SCN5AQ14524 2016 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 NRCAMQ92823 1304 aa18.18■□□□□ 0.5
PFDN6-207ENST00000491382 LGR5O75473 907 aa18.17■□□□□ 0.5
PFDN6-207ENST00000491382 IQCF3P0C7M6 154 aa18.17■□□□□ 0.5
PFDN6-207ENST00000491382 SELPP16109 830 aa18.17■□□□□ 0.5
PFDN6-207ENST00000491382 ZNF365Q70YC5 407 aa18.17■□□□□ 0.5
PFDN6-207ENST00000491382 LRRC8DQ7L1W4 858 aa18.17■□□□□ 0.5
PFDN6-207ENST00000491382 C16orf59Q7L2K0 433 aa18.17■□□□□ 0.5
PFDN6-207ENST00000491382 SERINC5Q86VE9 423 aa18.17■□□□□ 0.5
PFDN6-207ENST00000491382 CCDC83Q8IWF9 413 aa18.17■□□□□ 0.5
PFDN6-207ENST00000491382 LLPHQ9BRT6 129 aaKnown RBP18.17■□□□□ 0.5
PFDN6-207ENST00000491382 JAK2O60674 1132 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 DTNBO60941 627 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 ATG7O95352 703 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 CKBP12277 381 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 MARK3P27448 753 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 KRT2P35908 639 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 SLC26A2P50443 739 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 ZNF200P98182 395 aaPredicted RBP18.16■□□□□ 0.5
PFDN6-207ENST00000491382 KRT76Q01546 638 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 PPFIA1Q13136 1202 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 FAM160B1Q5W0V3 765 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 ZNF746Q6NUN9 644 aaPredicted RBP18.16■□□□□ 0.5
PFDN6-207ENST00000491382 MIS18BP1Q6P0N0 1132 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 MOXD1Q6UVY6 613 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 PLPPR4Q7Z2D5 763 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 SMAP1Q8IYB5 467 aaPredicted RBP18.16■□□□□ 0.5
PFDN6-207ENST00000491382 LMBR1Q8WVP7 490 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 DHX38Q92620 1227 aaKnown RBP18.16■□□□□ 0.5
PFDN6-207ENST00000491382 LENG9Q96B70 501 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 SETD4Q9NVD3 440 aa18.16■□□□□ 0.5
PFDN6-207ENST00000491382 BACH1O14867 736 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 DHX15O43143 795 aaKnown RBP18.15■□□□□ 0.5
PFDN6-207ENST00000491382 TREHO43280 583 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 CCNE2O96020 404 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 ACTN1P12814 892 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 STAT5BP51692 787 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 SMAD3P84022 425 aaKnown RBP18.15■□□□□ 0.5
PFDN6-207ENST00000491382 ST3GAL1Q11201 340 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 HIC1Q14526 733 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 INF2Q27J81 1249 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 Q4G0T1 1027 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 DEFB128Q7Z7B8 93 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 NEK8Q86SG6 692 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 HERVK_113Q902F9 699 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 RIT2Q99578 217 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 NAP1L4Q99733 375 aaKnown RBP18.15■□□□□ 0.5
PFDN6-207ENST00000491382 GJB4Q9NTQ9 266 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 TRPC6Q9Y210 931 aa18.15■□□□□ 0.5
PFDN6-207ENST00000491382 MYH9P35579 1960 aaKnown RBP18.14■□□□□ 0.49
PFDN6-207ENST00000491382 CYP3A7-CYP3A51PA0A087WV96 503 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms