RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 RNPC3Q96LT9 517 aaKnown RBP21.1■□□□□ 0.97
NDUFB4-204ENST00000491335 UIMC1Q96RL1 719 aa21.1■□□□□ 0.97
NDUFB4-204ENST00000491335 GJB4Q9NTQ9 266 aa21.1■□□□□ 0.97
NDUFB4-204ENST00000491335 LIMCH1Q9UPQ0 1083 aa21.1■□□□□ 0.97
NDUFB4-204ENST00000491335 LAMA3Q16787 3333 aa21.09■□□□□ 0.97
NDUFB4-204ENST00000491335 M0R2N6 131 aa21.09■□□□□ 0.97
NDUFB4-204ENST00000491335 PITPNM1O00562 1244 aa21.09■□□□□ 0.97
NDUFB4-204ENST00000491335 CIITAP33076 1130 aa21.09■□□□□ 0.97
NDUFB4-204ENST00000491335 VWCEQ96DN2 955 aa21.09■□□□□ 0.97
NDUFB4-204ENST00000491335 RNPEPQ9H4A4 650 aa21.09■□□□□ 0.97
NDUFB4-204ENST00000491335 ZNF215Q9UL58 517 aaPredicted RBP21.09■□□□□ 0.97
NDUFB4-204ENST00000491335 C17orf102A2RUQ5 167 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 SLC34A2O95436 690 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 IQCF3P0C7M6 154 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 XBP1P17861 261 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 USP11P51784 963 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 ACTR2P61160 394 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 ST3GAL1Q11201 340 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 PRR16Q569H4 304 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 NSUN7Q8NE18 718 aaKnown RBP21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 TBCKQ8TEA7 893 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 PHF20Q9BVI0 1012 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 SETD4Q9NVD3 440 aa21.08■□□□□ 0.97
NDUFB4-204ENST00000491335 DDX39AO00148 427 aaKnown RBP21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 IPO5O00410 1097 aaKnown RBP21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 DHX15O43143 795 aaKnown RBP21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 JAK2O60674 1132 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 HOXC8P31273 242 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 PTK7Q13308 1070 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 PSRC1Q6PGN9 363 aaPredicted RBP21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 RPUSD2Q8IZ73 545 aaKnown RBP21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 CCDC155Q8N6L0 562 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 CAGE1Q8TC20 777 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 WASF1Q92558 559 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 GLG1Q92896 1179 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 ATP6V0A1Q93050 837 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 WNT8BQ93098 351 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 PCYT2Q99447 389 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 ZNF577Q9BSK1 485 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 SMARCAD1Q9H4L7 1026 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 TET1Q8NFU7 2136 aa21.07■□□□□ 0.96
NDUFB4-204ENST00000491335 LGR5O75473 907 aa21.06■□□□□ 0.96
NDUFB4-204ENST00000491335 FGBP02675 491 aa21.06■□□□□ 0.96
NDUFB4-204ENST00000491335 MARK3P27448 753 aa21.06■□□□□ 0.96
NDUFB4-204ENST00000491335 SETQ01105 290 aaPredicted RBP21.06■□□□□ 0.96
NDUFB4-204ENST00000491335 TRIM71Q2Q1W2 868 aaKnown RBP21.06■□□□□ 0.96
NDUFB4-204ENST00000491335 DEFB128Q7Z7B8 93 aa21.06■□□□□ 0.96
NDUFB4-204ENST00000491335 LENG9Q96B70 501 aa21.06■□□□□ 0.96
NDUFB4-204ENST00000491335 ERAP1Q9NZ08 941 aa21.06■□□□□ 0.96
NDUFB4-204ENST00000491335 TREHO43280 583 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 ATG7O95352 703 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 CCNE2O96020 404 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 CKBP12277 381 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 SELPP16109 830 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 RBL2Q08999 1139 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 RASIP1Q5U651 963 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 OTOP2Q7RTS6 562 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 SERINC5Q86VE9 423 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 OXER1Q8TDS5 423 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 AFAP1L1Q8TED9 768 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 HERVK_113Q902F9 699 aa21.05■□□□□ 0.96
NDUFB4-204ENST00000491335 EMSYQ7Z589 1322 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 SZT2Q5T011 3432 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 GNAT1P11488 350 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 RFC2P35250 354 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 ADAM17P78536 824 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 NONOQ15233 471 aaKnown RBP eCLIP21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 GPR153Q6NV75 609 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 KRT25Q7Z3Z0 450 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 CCDC83Q8IWF9 413 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 ZSCAN31Q96LW9 406 aaPredicted RBP21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 AZI2Q9H6S1 392 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 UPF2Q9HAU5 1272 aaKnown RBP21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 TBC1D22BQ9NU19 505 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 TANC1Q9C0D5 1861 aa21.04■□□□□ 0.96
NDUFB4-204ENST00000491335 MSH4O15457 936 aa21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 STAT5BP51692 787 aa21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 RABEP1Q15276 862 aa21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 INF2Q27J81 1249 aa21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 ZNF618Q5T7W0 954 aa21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 ABHD15Q6UXT9 468 aa21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 LRRC8DQ7L1W4 858 aa21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 LMBR1Q8WVP7 490 aa21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 CXXC1Q9P0U4 656 aaPredicted RBP21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 LAMA2P24043 3122 aaKnown RBP21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 NRCAMQ92823 1304 aa21.03■□□□□ 0.96
NDUFB4-204ENST00000491335 CYP3A7-CYP3A51PA0A087WV96 503 aa21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 CCDC194A0A1B0GVG4 234 aa21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 TDP2O95551 362 aa21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 CYP3A7P24462 503 aa21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 FOSBP53539 338 aa21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 SMAD3P84022 425 aaKnown RBP21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 PPFIA1Q13136 1202 aa21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 GPNMBQ14956 572 aa21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 PLPPR4Q7Z2D5 763 aa21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 FTOQ9C0B1 505 aaKnown RBP eCLIP21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 MYH9P35579 1960 aaKnown RBP21.02■□□□□ 0.96
NDUFB4-204ENST00000491335 IGKV6D-21A0A0A0MT36 114 aa21.01■□□□□ 0.95
NDUFB4-204ENST00000491335 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.01■□□□□ 0.95
NDUFB4-204ENST00000491335 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms