RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 C4orf32Q8N8J7 132 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 UIMC1Q96RL1 719 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 CFHR5Q9BXR6 569 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 CDK11BP21127 795 aaKnown RBP25.42■■□□□ 1.66
USF3-203ENST00000491165 USP11P51784 963 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 GOLGA8FQ08AF8 430 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 GOLGA8DPQ0D2H9 430 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 GRB14Q14449 540 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 PLEKHH3Q7Z736 793 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 DNAJC5GQ8N7S2 189 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 GJA10Q969M2 543 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 LENG9Q96B70 501 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 ZHX1Q9UKY1 873 aaPredicted RBP25.42■■□□□ 1.66
USF3-203ENST00000491165 KIAA1217Q5T5P2 1943 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 ACTN4O43707 911 aaKnown RBP25.42■■□□□ 1.66
USF3-203ENST00000491165 CYP3A4P08684 503 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 PTGDRQ13258 359 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 PTPN21Q16825 1174 aa25.42■■□□□ 1.66
USF3-203ENST00000491165 ZNF236Q9UL36 1845 aa25.41■■□□□ 1.66
USF3-203ENST00000491165 ALDH5A1P51649 535 aaPredicted RBP25.41■■□□□ 1.66
USF3-203ENST00000491165 HSP90AA4PQ58FG1 418 aa25.41■■□□□ 1.66
USF3-203ENST00000491165 LRRN4CLQ8ND94 238 aa25.41■■□□□ 1.66
USF3-203ENST00000491165 NSUN6Q8TEA1 469 aaKnown RBP25.41■■□□□ 1.66
USF3-203ENST00000491165 MAF1Q9H063 256 aa25.41■■□□□ 1.66
USF3-203ENST00000491165 IVNS1ABPQ9Y6Y0 642 aa25.41■■□□□ 1.66
USF3-203ENST00000491165 IGLV3-22A0A075B6J6 115 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 STRNO43815 780 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 H2AFXP16104 143 aaPredicted RBP25.4■■□□□ 1.66
USF3-203ENST00000491165 SPECC1LQ69YQ0 1117 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 PPP4R3AQ6IN85 833 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 BAG1Q99933 345 aaPredicted RBP25.4■■□□□ 1.66
USF3-203ENST00000491165 SRRTQ9BXP5 876 aaKnown RBP25.4■■□□□ 1.66
USF3-203ENST00000491165 KIF20AO95235 890 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 NR3C2P08235 984 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 MYCLP12524 364 aaPredicted RBP25.4■■□□□ 1.66
USF3-203ENST00000491165 ITGB5P18084 799 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 CIITAP33076 1130 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 LACTBP83111 547 aaPredicted RBP25.4■■□□□ 1.66
USF3-203ENST00000491165 PCNX4Q63HM2 1172 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 GRAMD1CQ8IYS0 662 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 PDILTQ8N807 584 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 DNERQ8NFT8 737 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 CSRNP2Q9H175 543 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 FAM53CQ9NYF3 392 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 TSKSQ9UJT2 592 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 PPP2R2CQ9Y2T4 447 aa25.4■■□□□ 1.66
USF3-203ENST00000491165 CYP3A7-CYP3A51PA0A087WV96 503 aa25.39■■□□□ 1.66
USF3-203ENST00000491165 CYP3A7P24462 503 aa25.39■■□□□ 1.66
USF3-203ENST00000491165 ZNF792Q3KQV3 632 aa25.39■■□□□ 1.66
USF3-203ENST00000491165 MORN1Q5T089 497 aa25.39■■□□□ 1.66
USF3-203ENST00000491165 ABRAQ8N0Z2 381 aa25.39■■□□□ 1.66
USF3-203ENST00000491165 CCDC34Q96HJ3 373 aa25.39■■□□□ 1.66
USF3-203ENST00000491165 MBOAT7Q96N66 472 aa25.39■■□□□ 1.66
USF3-203ENST00000491165 DDX25Q9UHL0 483 aaKnown RBP25.39■■□□□ 1.66
USF3-203ENST00000491165 GOLGA6L9A6NEM1 432 aa25.39■■□□□ 1.65
USF3-203ENST00000491165 STX10O60499 249 aa25.39■■□□□ 1.65
USF3-203ENST00000491165 ATP2C1P98194 919 aaPredicted RBP25.39■■□□□ 1.65
USF3-203ENST00000491165 IL17AQ16552 155 aa25.39■■□□□ 1.65
USF3-203ENST00000491165 PRR16Q569H4 304 aa25.39■■□□□ 1.65
USF3-203ENST00000491165 VSIG10LQ86VR7 867 aa25.39■■□□□ 1.65
USF3-203ENST00000491165 TRMT44Q8IYL2 757 aaKnown RBP25.39■■□□□ 1.65
USF3-203ENST00000491165 SPATA20Q8TB22 786 aa25.39■■□□□ 1.65
USF3-203ENST00000491165 TRIM47Q96LD4 638 aa25.39■■□□□ 1.65
USF3-203ENST00000491165 RGS20O76081 388 aa25.38■■□□□ 1.65
USF3-203ENST00000491165 VWA3AA6NCI4 1184 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 ERCC5P28715 1186 aaPredicted RBP25.37■■□□□ 1.65
USF3-203ENST00000491165 NPLOC4Q8TAT6 608 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 WDR11Q9BZH6 1224 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 EHMT1Q9H9B1 1298 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 EDNRBP24530 442 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 PSMC4P43686 418 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 CEP55Q53EZ4 464 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 USP49Q70CQ1 688 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 TC2NQ8N9U0 490 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 HAS1Q92839 578 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 ZNF446Q9NWS9 450 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 GJD2Q9UKL4 321 aa25.37■■□□□ 1.65
USF3-203ENST00000491165 TNPO2O14787 897 aaKnown RBP25.36■■□□□ 1.65
USF3-203ENST00000491165 URI1O94763 535 aaPredicted RBP25.36■■□□□ 1.65
USF3-203ENST00000491165 SP3Q02447 781 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 ARHGAP29Q52LW3 1261 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 MOXD1Q6UVY6 613 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 MNS1Q8NEH6 495 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 MTMR9Q96QG7 549 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 DOCK5Q9H7D0 1870 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 ZNF76P36508 570 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 CT47A1Q5JQC4 288 aaPredicted RBP25.36■■□□□ 1.65
USF3-203ENST00000491165 UBXN4Q92575 508 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 USP6NLQ92738 828 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 MXRA8Q9BRK3 442 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 UBIAD1Q9Y5Z9 338 aa25.36■■□□□ 1.65
USF3-203ENST00000491165 SLC15A5A6NIM6 579 aa25.35■■□□□ 1.65
USF3-203ENST00000491165 FANCGO15287 622 aa25.35■■□□□ 1.65
USF3-203ENST00000491165 ARP10275 920 aa25.35■■□□□ 1.65
USF3-203ENST00000491165 GCFC2P16383 781 aaKnown RBP25.35■■□□□ 1.65
USF3-203ENST00000491165 Q4G0T1 1027 aa25.35■■□□□ 1.65
USF3-203ENST00000491165 DPP9Q86TI2 863 aa25.35■■□□□ 1.65
USF3-203ENST00000491165 ETNPPLQ8TBG4 499 aa25.35■■□□□ 1.65
USF3-203ENST00000491165 MED15Q96RN5 788 aa25.35■■□□□ 1.65
USF3-203ENST00000491165 KCNMB3Q9NPA1 279 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms