RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 CCDC113Q9H0I3 377 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 CD209Q9NNX6 404 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 TMEM110-MUSTN1A8MSY1 372 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 CHMP2AO43633 222 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 NOL4O94818 638 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 ITGA4P13612 1032 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 HDLBPQ00341 1268 aaKnown RBP12.23□□□□□ -0.45
VPS72-205ENST00000491094 DAAM2Q86T65 1068 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 MTMR9Q96QG7 549 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 CEP72Q9P209 647 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 CHORDC1Q9UHD1 332 aaPredicted RBP12.23□□□□□ -0.45
VPS72-205ENST00000491094 CHD4Q14839 1912 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 CASP5P51878 434 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 PSMC6P62333 389 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 CDK17Q00537 523 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 ALKBH5Q6P6C2 394 aaKnown RBP12.23□□□□□ -0.45
VPS72-205ENST00000491094 MAEAQ7L5Y9 396 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 KSR1Q8IVT5 923 aa12.23□□□□□ -0.45
VPS72-205ENST00000491094 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 DAPK3O43293 454 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 RBM5P52756 815 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS72-205ENST00000491094 MRPL12P52815 198 aaKnown RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 GPSM2P81274 684 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 SLC18A3Q16572 532 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 RIC8AQ9NPQ8 531 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 CCNL1Q9UK58 526 aaPredicted RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 HDAC9Q9UKV0 1011 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 GRID2IPA4D2P6 1211 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 GFPT2O94808 682 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 CNBD1Q8NA66 436 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 NOVA2Q9UNW9 492 aaKnown RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 GRIN2DO15399 1336 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 GOLGA6L7A0A1B0GV03 622 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 GCOM1H8Y6P7 765 aaPredicted RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 MYZAPP0CAP1 466 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 ZNF76P36508 570 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 USP8P40818 1118 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 NAB2Q15742 525 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 SHROOM1Q2M3G4 852 aaPredicted RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 RTFDC1Q9BY42 306 aaPredicted RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 JMJD4Q9H9V9 463 aa12.22□□□□□ -0.45
VPS72-205ENST00000491094 ZNF142P52746 1687 aaPredicted RBP12.22□□□□□ -0.45
VPS72-205ENST00000491094 PARP4Q9UKK3 1724 aaKnown RBP12.21□□□□□ -0.45
VPS72-205ENST00000491094 SART1O43290 800 aaKnown RBP12.21□□□□□ -0.45
VPS72-205ENST00000491094 GCNT3O95395 438 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 HNRNPH1P31943 449 aaKnown RBP12.21□□□□□ -0.45
VPS72-205ENST00000491094 FLT3P36888 993 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 CASP4P49662 377 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 KCNA1Q09470 495 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 ZNF211Q13398 564 aaPredicted RBP12.21□□□□□ -0.45
VPS72-205ENST00000491094 ARHGAP44Q17R89 818 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 EXOC3L4Q17RC7 722 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 KRT71Q3SY84 523 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 HAS1Q92839 578 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 CUL5Q93034 780 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 CCT8L2Q96SF2 557 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 PCDHA1Q9Y5I3 950 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 RSPH10B2B2RC85 870 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 HGSO14964 777 aaPredicted RBP12.21□□□□□ -0.45
VPS72-205ENST00000491094 RSPH10BP0C881 870 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 HNRNPH3P31942 346 aaKnown RBP12.21□□□□□ -0.45
VPS72-205ENST00000491094 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 TBC1D10BQ4KMP7 808 aaPredicted RBP12.21□□□□□ -0.45
VPS72-205ENST00000491094 ZNF662Q6ZS27 426 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 ZNF571Q7Z3V5 609 aaPredicted RBP12.21□□□□□ -0.45
VPS72-205ENST00000491094 SCFD1Q8WVM8 642 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 ANKS1AQ92625 1134 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 DNAJC19Q96DA6 116 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 MTMR4Q9NYA4 1195 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.45
VPS72-205ENST00000491094 PRLRP16471 622 aa12.21□□□□□ -0.46
VPS72-205ENST00000491094 UBXN2AP68543 259 aa12.21□□□□□ -0.46
VPS72-205ENST00000491094 MMS22LQ6ZRQ5 1243 aa12.21□□□□□ -0.46
VPS72-205ENST00000491094 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.46
VPS72-205ENST00000491094 B4GALNT4Q76KP1 1039 aa12.21□□□□□ -0.46
VPS72-205ENST00000491094 SFR1Q86XK3 245 aa12.21□□□□□ -0.46
VPS72-205ENST00000491094 CEP57Q86XR8 500 aa12.21□□□□□ -0.46
VPS72-205ENST00000491094 RNF10Q8N5U6 811 aaKnown RBP12.21□□□□□ -0.46
VPS72-205ENST00000491094 PIGOQ8TEQ8 1089 aa12.21□□□□□ -0.46
VPS72-205ENST00000491094 JPH2Q9BR39 696 aaPredicted RBP12.21□□□□□ -0.46
VPS72-205ENST00000491094 NARFQ9UHQ1 456 aa12.21□□□□□ -0.46
VPS72-205ENST00000491094 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 SSU72P8A0A1W2PR75 194 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 SETQ01105 290 aaPredicted RBP12.2□□□□□ -0.46
VPS72-205ENST00000491094 SF3B2Q13435 895 aaKnown RBP12.2□□□□□ -0.46
VPS72-205ENST00000491094 CCDC114Q96M63 670 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 SH3GL2Q99962 352 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 LRRC27Q9C0I9 530 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 MYH3P11055 1940 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 TOGARAM1Q9Y4F4 1720 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 TTI1O43156 1089 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 HOXA13P31271 388 aaPredicted RBP12.2□□□□□ -0.46
VPS72-205ENST00000491094 IQCKQ8N0W5 287 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 USP38Q8NB14 1042 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 MDM1Q8TC05 714 aa12.2□□□□□ -0.46
VPS72-205ENST00000491094 ZNF473Q8WTR7 871 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms