RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 PPFIA4O75335 1185 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 OR52Z1P0C646 297 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 HOXD8P13378 290 aaPredicted RBP18.89■□□□□ 0.61
SFXN5-220ENST00000490056 CAPN2P17655 700 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 TCF7P36402 384 aaPredicted RBP18.89■□□□□ 0.61
SFXN5-220ENST00000490056 KRT76Q01546 638 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 CEBPZQ03701 1054 aaKnown RBP18.89■□□□□ 0.61
SFXN5-220ENST00000490056 ZNF746Q6NUN9 644 aaPredicted RBP18.89■□□□□ 0.61
SFXN5-220ENST00000490056 TRIM50Q86XT4 487 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 SLFN12Q8IYM2 578 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 PPP1R13LQ8WUF5 828 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 VTI1AQ96AJ9 217 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 PCYT2Q99447 389 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 POLR3EQ9NVU0 708 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 TCEAL9Q9UHQ7 104 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 VAV3Q9UKW4 847 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 CLIC4Q9Y696 253 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 ELP1O95163 1332 aa18.89■□□□□ 0.61
SFXN5-220ENST00000490056 MOXD2PA6NHM9 499 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 CAPN15O75808 1086 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 ATG7O95352 703 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 LGALS2P05162 132 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 COL6A1P12109 1028 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 CHMP4BP1P59074 171 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 PSMC6P62333 389 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 SF3A1Q15459 793 aaKnown RBP18.88■□□□□ 0.61
SFXN5-220ENST00000490056 B3GNT9Q6UX72 402 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 ABHD15Q6UXT9 468 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 UBE2Q1Q7Z7E8 422 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 KAT2BQ92831 832 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 USP28Q96RU2 1077 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 C16orf70Q9BSU1 422 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 C11orf49Q9H6J7 331 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 TTC12Q9H892 705 aaPredicted RBP18.88■□□□□ 0.61
SFXN5-220ENST00000490056 TFIP11Q9UBB9 837 aaKnown RBP18.88■□□□□ 0.61
SFXN5-220ENST00000490056 PCDHA12Q9UN75 941 aa18.88■□□□□ 0.61
SFXN5-220ENST00000490056 EML1O00423 815 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 KPNA6O60684 536 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 SUPT20HL2P0C7V6 817 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 SPIRE1Q08AE8 756 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 PPP2R5CQ13362 524 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 NCAPH2Q6IBW4 605 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 MIER3Q7Z3K6 550 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 NECAB2Q7Z6G3 386 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 CHAMP1Q96JM3 812 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 IPO9Q96P70 1041 aaKnown RBP18.87■□□□□ 0.61
SFXN5-220ENST00000490056 MTG1Q9BT17 334 aaPredicted RBP18.87■□□□□ 0.61
SFXN5-220ENST00000490056 DISC1Q9NRI5 854 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 SAMM50Q9Y512 469 aa18.87■□□□□ 0.61
SFXN5-220ENST00000490056 MYH15Q9Y2K3 1946 aa18.86■□□□□ 0.61
SFXN5-220ENST00000490056 WDR64B1ANS9 1081 aa18.86■□□□□ 0.61
SFXN5-220ENST00000490056 LGR5O75473 907 aa18.86■□□□□ 0.61
SFXN5-220ENST00000490056 TECP42680 631 aa18.86■□□□□ 0.61
SFXN5-220ENST00000490056 ATN1P54259 1190 aaPredicted RBP18.86■□□□□ 0.61
SFXN5-220ENST00000490056 ATP2C1P98194 919 aaPredicted RBP18.86■□□□□ 0.61
SFXN5-220ENST00000490056 IL17AQ16552 155 aa18.86■□□□□ 0.61
SFXN5-220ENST00000490056 SWSAP1Q6NVH7 229 aa18.86■□□□□ 0.61
SFXN5-220ENST00000490056 MIS18BP1Q6P0N0 1132 aa18.86■□□□□ 0.61
SFXN5-220ENST00000490056 CCDC60Q8IWA6 550 aaPredicted RBP18.86■□□□□ 0.61
SFXN5-220ENST00000490056 GLT1D1Q96MS3 346 aa18.86■□□□□ 0.61
SFXN5-220ENST00000490056 PCDHA10Q9Y5I2 948 aa18.86■□□□□ 0.61
SFXN5-220ENST00000490056 GRIN2DO15399 1336 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 BACH1O14867 736 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 CABYRO75952 493 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 PSAPP07602 524 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 PSEN2P49810 448 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 JAK3P52333 1124 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 NUCB2P80303 420 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 PTPAQ15257 358 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 SMAP1Q8IYB5 467 aaPredicted RBP18.85■□□□□ 0.61
SFXN5-220ENST00000490056 GLG1Q92896 1179 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 ZNF396Q96N95 335 aaPredicted RBP18.85■□□□□ 0.61
SFXN5-220ENST00000490056 STARD7Q9NQZ5 370 aa18.85■□□□□ 0.61
SFXN5-220ENST00000490056 IGKV6D-21A0A0A0MT36 114 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 POTEMA6NI47 508 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 H3BRB1 525 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 LAD1O00515 517 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 F2P00734 622 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 MARK3P27448 753 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 SFNP31947 248 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 PRPHP41219 470 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 DNM1Q05193 864 aaKnown RBP18.84■□□□□ 0.61
SFXN5-220ENST00000490056 MFSD10Q14728 455 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 KIAA0753Q2KHM9 967 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 NBPF20Q3BBV1 942 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 SLC39A5Q6ZMH5 540 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 SMARCAD1Q9H4L7 1026 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 TUT1Q9H6E5 874 aaKnown RBP18.84■□□□□ 0.61
SFXN5-220ENST00000490056 AZI2Q9H6S1 392 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 ZNF302Q9NR11 478 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 GABBR1Q9UBS5 961 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 SCN10AQ9Y5Y9 1956 aa18.84■□□□□ 0.61
SFXN5-220ENST00000490056 EMSYQ7Z589 1322 aa18.83■□□□□ 0.61
SFXN5-220ENST00000490056 HAS3O00219 553 aa18.83■□□□□ 0.6
SFXN5-220ENST00000490056 MARCKSP29966 332 aaPredicted RBP18.83■□□□□ 0.6
SFXN5-220ENST00000490056 STAT5BP51692 787 aa18.83■□□□□ 0.6
SFXN5-220ENST00000490056 ITGA7Q13683 1181 aa18.83■□□□□ 0.6
SFXN5-220ENST00000490056 UGCGQ16739 394 aa18.83■□□□□ 0.6
SFXN5-220ENST00000490056 PDXDC2PQ6P474 469 aa18.83■□□□□ 0.6
SFXN5-220ENST00000490056 DTHD1Q6ZMT9 781 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms