RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PPP1R1BQ9UD71 204 aaPredicted RBP5.99□□□□□ -1.45
HMGN1-218ENST00000490032 CROTQ9UKG9 612 aa5.99□□□□□ -1.45
HMGN1-218ENST00000490032 TCRBV5S4A2TA0A5A2 114 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 CCDC85CA6NKD9 419 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 B4GALT3O60512 393 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 CHGBP05060 677 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 FAM153BP0C7A2 387 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 PAK1Q13153 545 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 HHIPL2Q6UWX4 724 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 KCTD1Q719H9 257 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 SH3RF2Q8TEC5 729 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 TMEM168Q9H0V1 697 aa5.98□□□□□ -1.45
HMGN1-218ENST00000490032 ARVCFO00192 962 aa5.97□□□□□ -1.45
HMGN1-218ENST00000490032 CYP1A1P04798 512 aaPredicted RBP5.97□□□□□ -1.45
HMGN1-218ENST00000490032 GABREP78334 506 aa5.97□□□□□ -1.45
HMGN1-218ENST00000490032 ZC3H12BQ5HYM0 836 aaKnown RBP5.97□□□□□ -1.45
HMGN1-218ENST00000490032 CD276Q5ZPR3 534 aa5.97□□□□□ -1.45
HMGN1-218ENST00000490032 KISS1RQ969F8 398 aaPredicted RBP5.97□□□□□ -1.45
HMGN1-218ENST00000490032 DEPDC7Q96QD5 511 aa5.97□□□□□ -1.45
HMGN1-218ENST00000490032 DHRS4Q9BTZ2 278 aa5.97□□□□□ -1.45
HMGN1-218ENST00000490032 SSBP3Q9BWW4 388 aaPredicted RBP5.97□□□□□ -1.45
HMGN1-218ENST00000490032 KDM2BQ8NHM5 1336 aa5.97□□□□□ -1.45
HMGN1-218ENST00000490032 FAM221BA6H8Z2 402 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 ACOT7O00154 380 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 CKMP06732 381 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 ENO2P09104 434 aaPredicted RBP5.96□□□□□ -1.46
HMGN1-218ENST00000490032 NAT1P18440 290 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 SURF1Q15526 300 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 TRMT10BQ6PF06 316 aaKnown RBP5.96□□□□□ -1.46
HMGN1-218ENST00000490032 DBX2Q6ZNG2 339 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 PLEKHH3Q7Z736 793 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 MTDHQ86UE4 582 aaKnown RBP5.96□□□□□ -1.46
HMGN1-218ENST00000490032 KLHL36Q8N4N3 616 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 TTC9BQ8N6N2 239 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 JMYQ8N9B5 988 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 PCDH19Q8TAB3 1148 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 MKL1Q969V6 931 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 IPO9Q96P70 1041 aaKnown RBP5.96□□□□□ -1.46
HMGN1-218ENST00000490032 SNTG2Q9NY99 539 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 FTSJ1Q9UET6 329 aa5.96□□□□□ -1.46
HMGN1-218ENST00000490032 MRPS23Q9Y3D9 190 aaKnown RBP5.96□□□□□ -1.46
HMGN1-218ENST00000490032 ZNF839A8K0R7 811 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 KLHL18O94889 574 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 KNG1P01042 644 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 MAGEA10P43363 369 aaPredicted RBP5.95□□□□□ -1.46
HMGN1-218ENST00000490032 NFATC3Q12968 1075 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 GPR19Q15760 415 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 SMAD2Q15796 467 aaKnown RBP5.95□□□□□ -1.46
HMGN1-218ENST00000490032 ZNF827Q17R98 1081 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 SKIDA1Q1XH10 827 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 NLGN4XQ8N0W4 816 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 FBXW5Q969U6 566 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 SAMD11Q96NU1 681 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 CD244Q9BZW8 370 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 KCND1Q9NSA2 647 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 SRPK3Q9UPE1 567 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 PCDHA8Q9Y5H6 950 aa5.95□□□□□ -1.46
HMGN1-218ENST00000490032 LAMTOR5O43504 91 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 AMY2AP04746 511 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 AMY2BP19961 511 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 PFKPQ01813 784 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 GUCY1A3Q02108 690 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 SOGA3Q5TF21 947 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 C16orf59Q7L2K0 433 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 NUDT10Q8NFP7 164 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 NUDT11Q96G61 164 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 BORCS6Q96GS4 357 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 SMPD4Q9NXE4 827 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 ZFP69BQ9UJL9 534 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 ADAM29Q9UKF5 820 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 JAG2Q9Y219 1238 aa5.94□□□□□ -1.46
HMGN1-218ENST00000490032 PYGMP11217 842 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 EPHB4P54760 987 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 ADAM17P78536 824 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 DBPQ10586 325 aaPredicted RBP5.93□□□□□ -1.46
HMGN1-218ENST00000490032 FIGNQ5HY92 759 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 PHF19Q5T6S3 580 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 ARHGAP36Q6ZRI8 547 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 KBTBD2Q8IY47 623 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 GSTCDQ8NEC7 633 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 IGDCC4Q8TDY8 1250 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 BARX1Q9HBU1 254 aaPredicted RBP5.93□□□□□ -1.46
HMGN1-218ENST00000490032 PPP4R1LQ9P1A2 415 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 ARHGAP20Q9P2F6 1191 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 CBLCQ9ULV8 474 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 PCDHA9Q9Y5H5 950 aa5.93□□□□□ -1.46
HMGN1-218ENST00000490032 FAM90A27PA6NNH2 459 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 ZNF561-AS1K7EIQ3 104 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 MAN2B1O00754 1011 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 FBXO21O94952 628 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 CRTAMO95727 393 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 IL18BPO95998 194 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 PDE6AP16499 860 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 PTPN1P18031 435 aaKnown RBP5.92□□□□□ -1.46
HMGN1-218ENST00000490032 GJA4P35212 333 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 PPP2CBP62714 309 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 PPP2CAP67775 309 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 SF3A1Q15459 793 aaKnown RBP5.92□□□□□ -1.46
HMGN1-218ENST00000490032 TRIM61Q5EBN2 209 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms